Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1659
(514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 45 4e-05
03_02_0484 + 8805053-8805538 44 5e-05
03_02_0483 - 8804021-8804485 44 5e-05
03_02_0485 - 8808139-8808618 44 7e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 43 1e-04
01_01_0229 - 1943473-1943922 43 1e-04
01_01_0231 + 1951047-1951499 42 2e-04
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 39 0.003
02_02_0077 - 6586638-6587165 37 0.008
01_01_0227 + 1933247-1933699 36 0.014
06_01_1017 - 7951985-7952425 32 0.24
11_02_0041 - 7669692-7670312 32 0.31
03_05_0543 - 25404630-25405408,25405461-25405605 30 0.95
02_01_0760 - 5639315-5639685,5640072-5640360 30 0.95
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 1.7
12_02_1174 - 26696869-26698191 29 2.9
12_01_0946 + 9376037-9376318 28 5.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 5.1
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 28 5.1
10_07_0141 + 13347648-13348331 27 6.7
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607... 27 6.7
11_01_0551 + 4361640-4363386,4363443-4363687 27 8.8
>03_02_0478 + 8775892-8776377
Length = 161
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +2
Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 428 TVESRLSSDGVLTVIAPRTPAATKNERAV 514
+++ + +GVLTV P+ A + +++
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSI 157
>03_02_0484 + 8805053-8805538
Length = 161
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +2
Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 428 TVESRLSSDGVLTVIAPR 481
+++ + +GVLTV P+
Sbjct: 130 QIKASM-ENGVLTVTVPK 146
>03_02_0483 - 8804021-8804485
Length = 154
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +2
Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 428 TVESRLSSDGVLTVIAPR 481
+++ + +GVLTV P+
Sbjct: 123 QIKASM-ENGVLTVTVPK 139
>03_02_0485 - 8808139-8808618
Length = 159
Score = 44.0 bits (99), Expect = 7e-05
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +2
Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 428 TVESRLSSDGVLTVIAPR 481
+++ + +GVLTV P+
Sbjct: 128 QIKASM-ENGVLTVTVPK 144
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Frame = +2
Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAV 514
+ R QF RR+ LPEN D V++ L +GVLTV P+ +A+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAI 146
>01_01_0229 - 1943473-1943922
Length = 149
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Frame = +2
Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370
A AN V T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 38 AFANARVDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95
Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAV 514
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+
Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAI 145
>01_01_0231 + 1951047-1951499
Length = 150
Score = 42.3 bits (95), Expect = 2e-04
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Frame = +2
Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAV 514
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAI 146
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +2
Query: 191 PWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE-- 364
P + +A + + + + ++ D+ S EE+ V D +++ G+H++ + E
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 365 ----HGYISRQ----FTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATK 499
G+ + + R ALP+ C+ V + L +GVL V P+T K
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.008
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Frame = +2
Query: 134 PDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKT 313
PD+L + PT R Y R + MA DV S + +D+ +P ++ V+
Sbjct: 25 PDELERQLNPPT--RAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEV 80
Query: 314 ADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALPENCNPDTVESRLSSD 454
DG V+ R D+ G Y+ + F RR+ LPE+ + D V + D
Sbjct: 81 EDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEY-KD 139
Query: 455 GVLTV-IAPRTPAATKNERAV 514
GVLTV + + P K R V
Sbjct: 140 GVLTVTVDKKPPPEPKKPRVV 160
>01_01_0227 + 1933247-1933699
Length = 150
Score = 36.3 bits (80), Expect = 0.014
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 332 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 511
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 512 V 514
+
Sbjct: 146 I 146
>06_01_1017 - 7951985-7952425
Length = 146
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 299 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 466
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 467 VIAPRTPAATK 499
V+ P+ PA +
Sbjct: 124 VVVPKEPAPAR 134
>11_02_0041 - 7669692-7670312
Length = 206
Score = 31.9 bits (69), Expect = 0.31
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 383 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAV 514
+F RR+ +P + V +RL DGVLTV P+ P E V
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRV 183
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 427
+ ++LD F EEI V + G++ G ER SR F + + LP +CN D
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94
Query: 428 TVESRLSSDGVLTVIAPRTPA 490
+ ++ ++ + + +TP+
Sbjct: 95 GIRAKFENEALTITLPKKTPS 115
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/98 (21%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +2
Query: 218 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 373
R + + +++++++ +V +++ V DG + + G+ E+R +D G +
Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170
Query: 374 ISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTP 487
+ + LPE+ + + + + DGVL V PR+P
Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSP 207
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 84 DTNRTAFAIRTSDWRLLRTIS*RPSSRQRCPEITTVRGSRWRSPIETSVPPSPRIRINS 260
D NRT F R + LR ++ S R+ P+I VR + + P + P+PRI +++
Sbjct: 47 DKNRTGFLGREDFYNALRLVTVAQSGRELTPDI--VRSALY-GPAAAKI-PAPRINVST 101
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 263 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 442
V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 443 LSSDGVLTVIAPRTPAA 493
D L + P AA
Sbjct: 85 F-DDHKLIITLPLVAAA 100
>12_01_0946 + 9376037-9376318
Length = 93
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 155 VITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGY 325
++T T S RPWK N D T T + + + +++ +P +I + GY
Sbjct: 2 IVTTTSSTTTTRPWKTPTRENHDNQHTPTRSHN---IQANIRQDTPPDIDFRDRHGY 55
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +1
Query: 37 RMLK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 183
R++K + I P + PPSRS R+ + G S +HH +D Q L
Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 88 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEADGD 210
P + G R A P+G A D + L+ E+DG+
Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100
>10_07_0141 + 13347648-13348331
Length = 227
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 368 GYISRQFTRRYALPENCNPDTVESRLSSD-GVLTVIAPRTPAATKNERA 511
G+I+ +F RRY + ++ P+ E+ L+ D +L ++ A N RA
Sbjct: 31 GFITNKFGRRYGVGDHGTPE--EAALAHDRAILAILGAHASPAALNFRA 77
>01_07_0096 -
41059668-41059886,41059978-41060154,41060575-41060778,
41060874-41061089,41061698-41061961,41062413-41062654,
41062728-41062851,41062852-41062991,41063349-41063397,
41063735-41063891,41063982-41064130,41064267-41064299,
41064497-41064575,41064961-41065040,41065438-41065560
Length = 751
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 179 DYYRPWKQMAIAN---RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE 349
D+Y PW + A +DV ++S K ++V+ F +EI+ DG+V ++ E
Sbjct: 43 DWY-PWGEEAFEKARRKDVPIFLSSMKCHV---MEVESFENDEIAKILNDGFVSIKVDRE 98
Query: 350 ERQD 361
ER D
Sbjct: 99 ERPD 102
>11_01_0551 + 4361640-4363386,4363443-4363687
Length = 663
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 199 LPRTVVISG--HRWRDDGRQEIVRSKRQSEVLIAKAVRLVSQ 80
LP V I G RWRDDG + + +K +++K V Q
Sbjct: 574 LPEDVEIWGGLRRWRDDGAEMVKLTKAMCWEMVSKTSDTVDQ 615
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,326,111
Number of Sequences: 37544
Number of extensions: 266378
Number of successful extensions: 1052
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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