Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1653
         (454 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14153-1|CAA32365.1|  647|Drosophila melanogaster protein ( Dros...    31   0.96 
AY075383-1|AAL68221.1|  647|Drosophila melanogaster LD23140p pro...    31   0.96 
AE014296-3398|AAF51627.2|  647|Drosophila melanogaster CG4761-PA...    31   0.96 

>X14153-1|CAA32365.1|  647|Drosophila melanogaster protein (
           Drosophila Knrl genefor knirps-related protein. ).
          Length = 647

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 36  DGAFRYLKHRSPFPSNPSLATKGS-TSKLTLRHSPLRFSPDLLSGSRFRSGG 188
           DG+  Y  H+ P  ++PS+++  S  S  ++  S +R +P L  G +  SGG
Sbjct: 188 DGSVEYGSHKHPVVASPSVSSPDSHNSDSSVEVSSVRGNPLLHLGGKSNSGG 239


>AY075383-1|AAL68221.1|  647|Drosophila melanogaster LD23140p
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 36  DGAFRYLKHRSPFPSNPSLATKGS-TSKLTLRHSPLRFSPDLLSGSRFRSGG 188
           DG+  Y  H+ P  ++PS+++  S  S  ++  S +R +P L  G +  SGG
Sbjct: 188 DGSVEYGSHKHPVVASPSVSSPDSHNSDSSVEVSSVRGNPLLHLGGKSNSGG 239


>AE014296-3398|AAF51627.2|  647|Drosophila melanogaster CG4761-PA
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 36  DGAFRYLKHRSPFPSNPSLATKGS-TSKLTLRHSPLRFSPDLLSGSRFRSGG 188
           DG+  Y  H+ P  ++PS+++  S  S  ++  S +R +P L  G +  SGG
Sbjct: 188 DGSVEYGSHKHPVVASPSVSSPDSHNSDSSVEVSSVRGNPLLHLGGKSNSGG 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,852,452
Number of Sequences: 53049
Number of extensions: 240655
Number of successful extensions: 583
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)