Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1650
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p pro... 44 3e-04
AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-P... 44 3e-04
BT030129-1|ABN49268.1| 440|Drosophila melanogaster IP15743p pro... 31 1.5
AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-P... 31 1.5
AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-P... 31 1.5
BT011029-1|AAR30189.1| 382|Drosophila melanogaster RE45537p pro... 30 2.6
AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p pro... 30 2.6
AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p pro... 30 2.6
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 30 2.6
AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-P... 30 2.6
AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,... 30 2.6
AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,... 30 2.6
AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,... 30 2.6
AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,... 30 2.6
AE014296-2297|AAF49804.1| 535|Drosophila melanogaster CG10741-P... 30 2.6
AE014296-2296|AAN11828.1| 382|Drosophila melanogaster CG10741-P... 30 2.6
M27292-1|AAA28619.1| 150|Drosophila melanogaster NK-4 homeobox ... 30 3.4
BT015242-1|AAT94471.1| 416|Drosophila melanogaster RE01329p pro... 30 3.4
BT001295-1|AAN71050.1| 536|Drosophila melanogaster AT11052p pro... 30 3.4
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 30 3.4
AY059437-1|AAL13343.1| 441|Drosophila melanogaster GH03570p pro... 30 3.4
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P... 30 3.4
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 30 3.4
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 30 3.4
AE014297-3003|AAF55890.1| 416|Drosophila melanogaster CG7895-PA... 30 3.4
AE014134-1841|AAF52916.2| 842|Drosophila melanogaster CG5034-PA... 30 3.4
AE013599-3570|AAM68240.2| 539|Drosophila melanogaster CG30416-P... 30 3.4
X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein pr... 29 4.5
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro... 29 4.5
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein... 29 4.5
AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby p... 29 4.5
AE014297-95|AAF52123.1| 970|Drosophila melanogaster CG14650-PA ... 29 4.5
BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p pro... 29 7.9
AE014297-874|AAF54335.1| 1368|Drosophila melanogaster CG11033-PA... 29 7.9
>BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p
protein.
Length = 961
Score = 43.6 bits (98), Expect = 3e-04
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 14/72 (19%)
Frame = +2
Query: 101 QQYPQQ-RPITEVIGSQNFFFLQESEIDSP--VGTPQP----------PAIPNQV-SPPG 238
QQ+ Q RP+ EV+G+ F FLQ+SE+D+P + P P P PN V P
Sbjct: 514 QQFMQHSRPLAEVLGTGRFHFLQDSELDNPEALAPPPPTNQGLVFEQQPQQPNHVEEPTQ 573
Query: 239 PIPTQTFTNQHY 274
I T TFTNQ +
Sbjct: 574 AILTLTFTNQSF 585
>AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-PA
protein.
Length = 961
Score = 43.6 bits (98), Expect = 3e-04
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 14/72 (19%)
Frame = +2
Query: 101 QQYPQQ-RPITEVIGSQNFFFLQESEIDSP--VGTPQP----------PAIPNQV-SPPG 238
QQ+ Q RP+ EV+G+ F FLQ+SE+D+P + P P P PN V P
Sbjct: 514 QQFMQHSRPLAEVLGTGRFHFLQDSELDNPEALAPPPPTNQGLVFEQQPQQPNHVEEPTQ 573
Query: 239 PIPTQTFTNQHY 274
I T TFTNQ +
Sbjct: 574 AILTLTFTNQSF 585
>BT030129-1|ABN49268.1| 440|Drosophila melanogaster IP15743p
protein.
Length = 440
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 376 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 540
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-PA,
isoform A protein.
Length = 1901
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 376 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 540
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-PB,
isoform B protein.
Length = 1913
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 376 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 540
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>BT011029-1|AAR30189.1| 382|Drosophila melanogaster RE45537p
protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 158 FLQESEIDSPVGTPQPPAIP-NQVSPPG---PIPTQTFTNQHYVQ 280
F ++S +P TP P P QVSP P T T +QHY Q
Sbjct: 148 FAKKSPTPTPTPTPSPSGTPKQQVSPLAYGLPSSTSTAASQHYQQ 192
>AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p
protein.
Length = 975
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 446 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 486
>AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p protein.
Length = 1351
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1000 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1040
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 30.3 bits (65), Expect = 2.6
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 367 CTGTRAHAARTYAPARSS----ARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLC 534
C G R ++ AR S +R + AAA RR R S+N T SRR + R C
Sbjct: 1611 CEGIRTFPCANFSTARKSWVCSSRCRSDAAAASVLRRAGHECRLSYN-TMSRRAASGRSC 1669
Query: 535 YARS 546
+R+
Sbjct: 1670 KSRT 1673
>AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-PA
protein.
Length = 1059
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 370 TGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRR 513
+ T A A PA++SA + A AAA A STS S +AT ++
Sbjct: 231 SATGADALPPALPAKASATAAAAAAAAAAASNASTSTSASVSATEQQQ 278
>AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,
isoform A protein.
Length = 975
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 446 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 486
>AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,
isoform D protein.
Length = 1028
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 499 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,
isoform C protein.
Length = 1222
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 871 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 911
>AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,
isoform B protein.
Length = 1351
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 397 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1000 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1040
>AE014296-2297|AAF49804.1| 535|Drosophila melanogaster CG10741-PA,
isoform A protein.
Length = 535
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 158 FLQESEIDSPVGTPQPPAIP-NQVSPPG---PIPTQTFTNQHYVQ 280
F ++S +P TP P P QVSP P T T +QHY Q
Sbjct: 301 FAKKSPTPTPTPTPSPSGTPKQQVSPLAYGLPSSTSTAASQHYQQ 345
>AE014296-2296|AAN11828.1| 382|Drosophila melanogaster CG10741-PB,
isoform B protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 158 FLQESEIDSPVGTPQPPAIP-NQVSPPG---PIPTQTFTNQHYVQ 280
F ++S +P TP P P QVSP P T T +QHY Q
Sbjct: 148 FAKKSPTPTPTPTPSPSGTPKQQVSPLAYGLPSSTSTAASQHYQQ 192
>M27292-1|AAA28619.1| 150|Drosophila melanogaster NK-4 homeobox
protein.
Length = 150
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 101 QQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQ 280
++Y +R + G L+ +DSP T PP IPN V P + QH+ Q
Sbjct: 86 RRYKSKRGDIDCEGIAKHLKLKSEPLDSP--TSLPPPIPNHVMWPPTMQQSQQQQQHHAQ 143
>BT015242-1|AAT94471.1| 416|Drosophila melanogaster RE01329p
protein.
Length = 416
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 101 QQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQ 280
++Y +R + G L+ +DSP T PP IPN V P + QH+ Q
Sbjct: 352 RRYKSKRGDIDCEGIAKHLKLKSEPLDSP--TSLPPPIPNHVMWPPTMQQSQQQQQHHAQ 409
>BT001295-1|AAN71050.1| 536|Drosophila melanogaster AT11052p
protein.
Length = 536
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 164 QESEIDSPVGTPQPPAIPNQVSPPGPIPT 250
+ES P G P P +P+ + PP +P+
Sbjct: 288 EESNSSPPSGIPPPSQLPSDIPPPSQLPS 316
Score = 29.9 bits (64), Expect = 3.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQ 253
P GTP P +P ++PP +P +
Sbjct: 335 PSGTPPPSRLPTSITPPSQVPNK 357
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 182 SPVGTPQPPAIPNQVSPPGPIP 247
SP P PPA P SPPGP P
Sbjct: 102 SPKVEPPPPAPPGVESPPGPQP 123
>AY059437-1|AAL13343.1| 441|Drosophila melanogaster GH03570p
protein.
Length = 441
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 191 GTPQPPAIPNQVSPPGPIPTQTFTNQ 268
GTP P IP VS P P+P+Q +Q
Sbjct: 85 GTPVPVPIPIPVSVPVPVPSQQIQSQ 110
>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
protein.
Length = 1895
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +2
Query: 110 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPG 289
P +R I + +++ + +P P P P Q SPP P Q T ++ Q
Sbjct: 366 PNRRDIPQSKARESWIANLNKKPTTPPSPPAPQPSPPQQSPPQQAPPQPPTEENATQKAT 425
Query: 290 GR 295
GR
Sbjct: 426 GR 427
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 182 SPVGTPQPPAIPNQVSPPGPIP 247
SP P PPA P SPPGP P
Sbjct: 365 SPKVEPPPPAPPGVESPPGPQP 386
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 182 SPVGTPQPPAIPNQVSPPGPIP 247
SP P PPA P SPPGP P
Sbjct: 365 SPKVEPPPPAPPGVESPPGPQP 386
>AE014297-3003|AAF55890.1| 416|Drosophila melanogaster CG7895-PA
protein.
Length = 416
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 101 QQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQ 280
++Y +R + G L+ +DSP T PP IPN V P + QH+ Q
Sbjct: 352 RRYKSKRGDIDCEGIAKHLKLKSEPLDSP--TSLPPPIPNHVMWPPTMQQSQQQQQHHAQ 409
>AE014134-1841|AAF52916.2| 842|Drosophila melanogaster CG5034-PA
protein.
Length = 842
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 191 GTPQPPAIPNQVSPPGPIPTQTFTNQ 268
GTP P IP VS P P+P+Q +Q
Sbjct: 85 GTPVPVPIPIPVSVPVPVPSQQIQSQ 110
>AE013599-3570|AAM68240.2| 539|Drosophila melanogaster CG30416-PA
protein.
Length = 539
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 164 QESEIDSPVGTPQPPAIPNQVSPPGPIPT 250
+ES P G P P +P+ + PP +P+
Sbjct: 288 EESNSSPPSGIPPPSQLPSDIPPPSQLPS 316
Score = 29.9 bits (64), Expect = 3.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQ 253
P GTP P +P ++PP +P +
Sbjct: 335 PSGTPPPSRLPTSITPPSQVPNK 357
>X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein
protein.
Length = 850
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 391 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 497 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
protein.
Length = 1028
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 391 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 497 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
protein.
Length = 1222
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 391 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 869 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 911
>AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby
protein.
Length = 1354
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 391 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 522
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1001 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1043
>AE014297-95|AAF52123.1| 970|Drosophila melanogaster CG14650-PA
protein.
Length = 970
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 92 YFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPP 235
Y A Q QQ+ +QN+ Q+ +PV PP P+ PP
Sbjct: 31 YLAHQQQQQQQQQHQHQTQNYLIHQQQHGQAPVPLMWPPPPPHLAGPP 78
>BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p protein.
Length = 1345
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 324 RLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPI 431
+L+ + R+ +++ L CP + L T LCPP+
Sbjct: 1139 QLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPL 1174
>AE014297-874|AAF54335.1| 1368|Drosophila melanogaster CG11033-PA
protein.
Length = 1368
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 324 RLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPI 431
+L+ + R+ +++ L CP + L T LCPP+
Sbjct: 1162 QLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPL 1197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,845,672
Number of Sequences: 53049
Number of extensions: 590260
Number of successful extensions: 4434
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4408
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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