BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1648
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107786-1|AAI07787.1| 575|Homo sapiens BCL2-associated athanog... 30 10.0
BC014656-1|AAH14656.1| 575|Homo sapiens BCL2-associated athanog... 30 10.0
BC006418-1|AAH06418.1| 575|Homo sapiens BCL2-associated athanog... 30 10.0
AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containi... 30 10.0
AL137582-1|CAB70824.1| 616|Homo sapiens hypothetical protein pr... 30 10.0
AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containi... 30 10.0
AK222800-1|BAD96520.1| 575|Homo sapiens BCL2-associated athanog... 30 10.0
AF127139-1|AAF26839.1| 575|Homo sapiens Bcl-2-binding protein B... 30 10.0
AF071218-1|AAF69592.2| 575|Homo sapiens docking protein CAIR-1 ... 30 10.0
AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein. 30 10.0
>BC107786-1|AAI07787.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>BC014656-1|AAH14656.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>BC006418-1|AAH06418.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containing
2 protein.
Length = 1438
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 125 YAFTGSAAPSAASFISCSVCLYYSIFRFLYY 217
+AFT F+ CS+ + S F FLYY
Sbjct: 112 WAFTNPCCAGLVLFLGCSIPMALSAFMFLYY 142
>AL137582-1|CAB70824.1| 616|Homo sapiens hypothetical protein
protein.
Length = 616
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 267 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 293
>AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containing
2 protein.
Length = 1438
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 125 YAFTGSAAPSAASFISCSVCLYYSIFRFLYY 217
+AFT F+ CS+ + S F FLYY
Sbjct: 112 WAFTNPCCAGLVLFLGCSIPMALSAFMFLYY 142
>AK222800-1|BAD96520.1| 575|Homo sapiens BCL2-associated athanogene
3 variant protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>AF127139-1|AAF26839.1| 575|Homo sapiens Bcl-2-binding protein BIS
protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>AF071218-1|AAF69592.2| 575|Homo sapiens docking protein CAIR-1
protein.
Length = 575
Score = 29.9 bits (64), Expect = 10.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 597 FHRNRFSHFPSHQGTYKIHMSIHKHIE 677
FH+ + +H+P+ QG Y+ H ++ I+
Sbjct: 225 FHQAQKTHYPAQQGEYQTHQPVYHKIQ 251
>AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein.
Length = 1438
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 125 YAFTGSAAPSAASFISCSVCLYYSIFRFLYY 217
+AFT F+ CS+ + S F FLYY
Sbjct: 112 WAFTNPCCAGLVLFLGCSIPMALSAFMFLYY 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,175,756
Number of Sequences: 237096
Number of extensions: 2215180
Number of successful extensions: 11911
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11911
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -