Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1648
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro...    53   4e-07
BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro...    52   1e-06
AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine nucl...    52   1e-06
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,...    52   1e-06
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,...    52   1e-06
AE014297-3204|AAF56037.2|  187|Drosophila melanogaster CG17623-P...    32   0.94 

>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
           protein.
          Length = 1506

 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
 Frame = +3

Query: 36  SGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQ---QHHQPH 161
           SGH+ SL+GA KLARRARSFKDDL+E+IS MR+      + H PH
Sbjct: 258 SGHKNSLKGA-KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPH 301


>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p
           protein.
          Length = 1416

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +3

Query: 36  SGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQ---QHHQPH 161
           SGH+ SL+G  KLARRARSFKDDL+E+IS MR+      + H PH
Sbjct: 154 SGHKNSLKGT-KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPH 197


>AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine
           nucleotide exchange factorDC3G protein.
          Length = 1383

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +3

Query: 36  SGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQ---QHHQPH 161
           SGH+ SL+G  KLARRARSFKDDL+E+IS MR+      + H PH
Sbjct: 120 SGHKNSLKGT-KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPH 163


>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
           isoform A protein.
          Length = 1571

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +3

Query: 36  SGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQ---QHHQPH 161
           SGH+ SL+G  KLARRARSFKDDL+E+IS MR+      + H PH
Sbjct: 258 SGHKNSLKGT-KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPH 301


>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
           isoform B protein.
          Length = 1520

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +3

Query: 36  SGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQ---QHHQPH 161
           SGH+ SL+G  KLARRARSFKDDL+E+IS MR+      + H PH
Sbjct: 258 SGHKNSLKGT-KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPH 301


>AE014297-3204|AAF56037.2|  187|Drosophila melanogaster CG17623-PA
           protein.
          Length = 187

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 3   LTEGEATGDPGSG-HRGSLRGANKLARRARSFKDDLLERISNMRS 134
           L  G ATG PGSG H G+  G N  +  + S ++ +L   S  RS
Sbjct: 98  LGSGSATGGPGSGHHHGASGGGNGGSSASSSRRESMLSPSSTRRS 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,859,615
Number of Sequences: 53049
Number of extensions: 699252
Number of successful extensions: 1690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)