Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1648
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80024-10|AAK18891.1|  297|Caenorhabditis elegans Serpentine rec...    28   6.0  
Z68748-5|CAA92956.2|  446|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical...    28   7.9  
AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U80024-10|AAK18891.1|  297|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 11 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 390 FENVCCYLFLLKLYGNVLLHTCIKFKVL 307
           FENV  Y+F++KL G + + TC+ + +L
Sbjct: 256 FENVGPYIFVIKLIG-IAIETCLIYWIL 282


>Z68748-5|CAA92956.2|  446|Caenorhabditis elegans Hypothetical
           protein F13H10.5 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 382 IFKTFNIYSPVSSMTITLEDKYDILYRFINIVNW*DQARF 501
           +F TF+I +  S +T TL  ++ I+  +IN  NW D  +F
Sbjct: 64  VFPTFSISNRHSLLTGTLPRRHGIIGDYIN--NWKDNLKF 101


>AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical
           protein W03G1.3 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 521 VFTLIRTLGNQALDYLQDQSEDSLKISSKSIQPFSESPGNIQN 649
           V +++  + N  +DYL  + +     +SK  +P +  PG++ N
Sbjct: 262 VRSIVNAMSNHWIDYLIPREQQGSFTTSKKTEPLTFFPGDLTN 304


>AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical
           protein C17B7.13 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 521 VFTLIRTLGNQALDYLQDQSEDSLKISSKSIQPFSESPGNIQN 649
           V +++  + N  +DYL  + +     +SK  +P +  PG++ N
Sbjct: 262 VRSIVNAMSNHWIDYLIPREQQGSFTTSKKTEPLTFFPGDLTN 304


>AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical
           protein K02E7.2 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 521 VFTLIRTLGNQALDYLQDQSEDSLKISSKSIQPFSESPGNIQN 649
           V +++  + N  +DYL  + +     +SK  +P +  PG++ N
Sbjct: 259 VRSIVNAMSNHWIDYLIPREQQGSFTTSKKTEPLTFFPGDLTN 301


>AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical
           protein R09E12.5 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 521 VFTLIRTLGNQALDYLQDQSEDSLKISSKSIQPFSESPGNIQN 649
           V +++  + N  +DYL  + +     +SK  +P +  PG++ N
Sbjct: 259 VRSIVNAMSNHWIDYLIPREQQGSFTTSKKTEPLTFFPGDLTN 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,335,478
Number of Sequences: 27780
Number of extensions: 376551
Number of successful extensions: 922
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)