Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1647
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325...    28   6.1  
01_06_1078 + 34378985-34380064,34380155-34380283,34380362-343804...    28   8.0  

>09_06_0172 +
           21329904-21331512,21331595-21331740,21332333-21332556,
           21333689-21334448
          Length = 912

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -2

Query: 346 PP*DISSKVSGIVTTAAPPSKPKQIT 269
           PP DI S   G VT  APPS P+  T
Sbjct: 331 PPADIPSTSRGEVTPPAPPSPPRVST 356


>01_06_1078 +
           34378985-34380064,34380155-34380283,34380362-34380430,
           34380536-34380588,34381309-34381421,34381565-34382132,
           34382520-34382580,34382624-34382665
          Length = 704

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 112 KQMNVVCGADLE*YRPILLPVSKM*I*DKVGVRTSC 219
           K ++ VC  D   YRP ++P+ K  I DK+   +SC
Sbjct: 380 KMLSEVCAFD---YRPAIMPILKAYIRDKLRKASSC 412


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,247,555
Number of Sequences: 37544
Number of extensions: 358734
Number of successful extensions: 639
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)