Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1647
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            25   0.90 
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    23   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   8.4  

>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 551 SIKSMLTLDPATQIDVGT*VC 613
           ++KS + +DPATQ D G   C
Sbjct: 80  TLKSKMEIDPATQKDAGYYEC 100


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 623 LPDFIGRRYPTY 658
           +PDF+G+RY  Y
Sbjct: 1   MPDFLGKRYKLY 12


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 27  ASDMTSKLQSVYTLILISIQKH 92
           A D+T    S++ L+ ISI ++
Sbjct: 264 AMDVTCSTSSIFNLVAISIDRY 285


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 12  VCHPSASDMTSKLQSVYTLILI 77
           +CHP  S   SKL      I++
Sbjct: 156 ICHPFISHTMSKLSRAVKFIIV 177


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 612 HTYVPTSICVAGSNVS 565
           HTY+PT + V  S VS
Sbjct: 250 HTYIPTCLIVIMSWVS 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,246
Number of Sequences: 438
Number of extensions: 4059
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)