Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1646
         (336 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   0.44 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   3.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   4.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   4.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   4.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   4.1  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   4.1  
Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related prot...    22   5.4  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   7.1  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 233 EQHGPLQGQHGKPQGQRGKLQEPQRHNEHR 144
           +Q  P Q Q  +PQ QR + Q PQ+    +
Sbjct: 461 QQQQPQQQQQQRPQQQRPQQQRPQQQRSQQ 490


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 148 TVAFVMAYDATGRKLPQQMSSGPVPPEDQLGT 53
           T A     D   RK  +QM+   +PPE+QL T
Sbjct: 305 TPAIQAMIDNLSRK--EQMTMRTIPPEEQLQT 334


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 245 NSGLEQHGPLQGQHGKPQGQRGKLQEPQRHNEH 147
           N+    HGPL+ +      Q  +LQ+ Q+   H
Sbjct: 221 NNNSLHHGPLRDKELTEHEQLERLQQQQQQQTH 253


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 245 NSGLEQHGPLQGQHGKPQGQRGKLQEPQRHNEH 147
           N+    HGPL+ +      Q  +LQ+ Q+   H
Sbjct: 221 NNNSLHHGPLRDKELTEHEQLERLQQQQQQQTH 253


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 245 NSGLEQHGPLQGQHGKPQGQRGKLQEPQRHNEH 147
           N+    HGPL+ +      Q  +LQ+ Q+   H
Sbjct: 173 NNNSLHHGPLRDKELTEHEQLERLQQQQQQQTH 205


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 245 NSGLEQHGPLQGQHGKPQGQRGKLQEPQRHNEH 147
           N+    HGPL+ +      Q  +LQ+ Q+   H
Sbjct: 221 NNNSLHHGPLRDKELTEHEQLERLQQQQQQQTH 253


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 103 PQQMSSGPVPPEDQLGT 53
           P  MS    PP+D +GT
Sbjct: 52  PLSMSKSQTPPQDTVGT 68


>Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related
           protease protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 178 SYRSHNGIMSTVAFVMAYDATGRKLPQQMSSGPVPPEDQL 59
           +Y+S  G ++   F   Y   G+   +Q S GP   E +L
Sbjct: 200 AYQSRYGGITDEMFCAGYKQGGQDTCRQDSGGPFVAEGKL 239


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 47  WRCPKLVFWRNRSTTHLLGQFP 112
           W   +  FW++RS  ++  +FP
Sbjct: 19  WIHRRYHFWKDRSVAYIKPRFP 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,030
Number of Sequences: 2352
Number of extensions: 5481
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)