Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1644
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    36   0.042
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    36   0.042
X97447-1|CAA66076.1|  878|Drosophila melanogaster Dos protein pr...    29   8.4  
AY122244-1|AAM52756.1|  798|Drosophila melanogaster SD02517p pro...    29   8.4  
AE014296-479|AAF47663.2|  798|Drosophila melanogaster CG1044-PB,...    29   8.4  
AE014296-478|AAF47662.1|  878|Drosophila melanogaster CG1044-PA,...    29   8.4  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 36.3 bits (80), Expect = 0.042
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 558 SVVFAHAARTHIDTLQSLQSRFCRLAVGAPW-VREERL 668
           S ++ +A+R++ID +Q  QSR  R+  GAPW +R E +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENI 835


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 36.3 bits (80), Expect = 0.042
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 558 SVVFAHAARTHIDTLQSLQSRFCRLAVGAPW-VREERL 668
           S ++ +A+R++ID +Q  QSR  R+  GAPW +R E +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENI 835


>X97447-1|CAA66076.1|  878|Drosophila melanogaster Dos protein
           protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 525 SPSTGLHA*KASVVFAHAARTHIDTLQSLQSRFCRLAVGA 644
           SP+T L+   ++++ A AA    + LQ  Q +  RLAV A
Sbjct: 235 SPATALYLNHSALIQAQAAAAAAEQLQQQQQQAARLAVSA 274


>AY122244-1|AAM52756.1|  798|Drosophila melanogaster SD02517p
           protein.
          Length = 798

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 525 SPSTGLHA*KASVVFAHAARTHIDTLQSLQSRFCRLAVGA 644
           SP+T L+   ++++ A AA    + LQ  Q +  RLAV A
Sbjct: 155 SPATALYLNHSALIQAQAAAAAAEQLQQQQQQAARLAVSA 194


>AE014296-479|AAF47663.2|  798|Drosophila melanogaster CG1044-PB,
           isoform B protein.
          Length = 798

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 525 SPSTGLHA*KASVVFAHAARTHIDTLQSLQSRFCRLAVGA 644
           SP+T L+   ++++ A AA    + LQ  Q +  RLAV A
Sbjct: 155 SPATALYLNHSALIQAQAAAAAAEQLQQQQQQAARLAVSA 194


>AE014296-478|AAF47662.1|  878|Drosophila melanogaster CG1044-PA,
           isoform A protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 525 SPSTGLHA*KASVVFAHAARTHIDTLQSLQSRFCRLAVGA 644
           SP+T L+   ++++ A AA    + LQ  Q +  RLAV A
Sbjct: 235 SPATALYLNHSALIQAQAAAAAAEQLQQQQQQAARLAVSA 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,830,077
Number of Sequences: 53049
Number of extensions: 792740
Number of successful extensions: 1675
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)