Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1642
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.9  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 221 GKVGGKCRNRLIHHYHIMD 277
           G+VGGK RN L+     MD
Sbjct: 64  GRVGGKRRNILLRRTDSMD 82


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 29  LNRAFKSRLGNKHGEIS 79
           LNR +  RL N  GE+S
Sbjct: 266 LNRYYLERLSNDMGEVS 282


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 29  LNRAFKSRLGNKHGEIS 79
           LNR +  RL N  GE+S
Sbjct: 266 LNRYYLERLSNDMGEVS 282


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 51  LDLKARFRGFIYYT 10
           L  +++ RGF+YYT
Sbjct: 131 LHYRSKRRGFVYYT 144


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 494 AESTTGSETRPTEKIRR 544
           A  TTG+ T PT ++R+
Sbjct: 252 AAMTTGTTTIPTRRLRK 268


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 373 KIYCVRILYIKTDILTEFKNLVSSGPQTNVPHIHNM 266
           K     +L ++ + L    NL+++   T  PH H M
Sbjct: 384 KSLLANVLDLEDNALASHNNLLNNVYSTPGPHHHTM 419


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 13/48 (27%), Positives = 16/48 (33%)
 Frame = +3

Query: 357 RTQYIFCLPLLIALSGYFSFTLTCR*AHGLEPEALADTGPSKCSASQN 500
           R Q   CL      SGY    LTC    G    ++      +C    N
Sbjct: 181 RQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNN 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,818
Number of Sequences: 438
Number of extensions: 2812
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)