Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1641
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 105 2e-23
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 104 5e-23
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 99 1e-21
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 98 3e-21
05_01_0103 + 686770-687017,687120-687270 98 4e-21
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 97 5e-21
03_06_0479 + 34217170-34217172,34217337-34217786 97 7e-21
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 96 2e-20
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 77 1e-14
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 55 3e-08
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 31 0.69
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 3.7
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 27 8.5
06_03_1458 + 30301585-30301775,30302131-30302245,30302345-303024... 27 8.5
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 27 8.5
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 105 bits (253), Expect = 2e-23
Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Frame = +2
Query: 65 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 241
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
ECRY +FDF++ T E +K K+F +SW PDT +V+ KMLY+SS D K+ L G
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDG 135
Query: 422 VQKYMQATDLSEAFQEAVLREA 487
+Q +QATD SE + V A
Sbjct: 136 IQVELQATDPSEMSMDIVKSRA 157
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 104 bits (249), Expect = 5e-23
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Frame = +2
Query: 65 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 241
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
+CR+ ++DF++ T+E K ++F + W PD KV+ KMLY+SS + KK L G
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNG 135
Query: 422 VQKYMQATDLSEAFQEAV 475
+Q +QATD E +A+
Sbjct: 136 IQLEVQATDAGEISLDAL 153
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 99 bits (238), Expect = 1e-21
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 241
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES- 69
Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
+CRY ++DF++ T E +K K+F ++W P +++ KMLY++S + ++ L G
Sbjct: 70 --DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDG 122
Query: 422 VQKYMQATDLSEAFQEAVLRE 484
V +QATD SE E +LRE
Sbjct: 123 VHYEIQATDPSELDIE-LLRE 142
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 98.3 bits (234), Expect = 3e-21
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Frame = +2
Query: 38 FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 214
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 215 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSF 394
FL L + +CRY L+DF++ T E +K K+F ++W P T +++ KMLYS+S
Sbjct: 62 FLASLPEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSK 113
Query: 395 DALKKSLVGVQKYMQATDLSEAFQEAVL-REAS 490
D +K+ L G +QATD +E Q +L R+A+
Sbjct: 114 DRIKQELDGFHYEIQATDPTETPQGWILVRDAA 146
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 97.9 bits (233), Expect = 4e-21
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +2
Query: 74 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 250
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 251 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVGVQK 430
CRY +FD+++ T E +K K+F ++W PDT +V+ KM+Y+SS D K+ L G+Q
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQV 112
Query: 431 YMQATDLSEAFQEAVLREAS 490
+QATD +E + + A+
Sbjct: 113 ELQATDPTEVGLDVIRGRAN 132
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 97.5 bits (232), Expect = 5e-21
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +2
Query: 71 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTG 247
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 248 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVGVQ 427
ECRY ++D ++ T E +K K+F SW PDT + + KMLY+SS D ++ L G+Q
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124
Query: 428 KYMQATDLSE 457
+QATD SE
Sbjct: 125 CEIQATDPSE 134
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 97.1 bits (231), Expect = 7e-21
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Frame = +2
Query: 68 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 244
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 245 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTVKVKKKMLYSSSFDALK 406
CRY ++D ++T T+ A + + K+F +SW P V+ KM+Y+SS + K
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
Query: 407 KSLVGVQKYMQATDLSE 457
K L GVQ +QATD SE
Sbjct: 123 KELDGVQIDLQATDPSE 139
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 95.9 bits (228), Expect = 2e-20
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 65 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 241
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
ECRY +FDF++ T E +K K+F +SW PDT KV+ KMLY+SS D K+ L G
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDG 380
Query: 422 VQ 427
+Q
Sbjct: 381 IQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 76.6 bits (180), Expect = 1e-14
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +2
Query: 74 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 250
+ V + K+ + E+K+ K HRYV+F I D ++ I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 251 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVGVQK 430
CRY ++D ++ + + +K K+F +SW P +++ K +Y+ S + + L GV
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHF 131
Query: 431 YMQATDLSEAFQEAVLREASR 493
+QATD + E + A+R
Sbjct: 132 EIQATDPDDMDLEVLRGRANR 152
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +2
Query: 74 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 250
+ V + K+ + E+ + K HRYV+F I D ++ I VE G Y+ F L +
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP----AD 95
Query: 251 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVGVQK 430
Y L DF C +K K+F +SW P ++ K +Y+ + + L GV
Sbjct: 96 AVYDL-DFVSDDNC-------RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHF 147
Query: 431 YMQATDLSEAFQEAVLREASR 493
+QATD + E + A+R
Sbjct: 148 EIQATDPDDMDLEVLRGRANR 168
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 30.7 bits (66), Expect = 0.69
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +2
Query: 314 KKQKLFLMSWCPDTV-KVKKKMLYSSSFDALKKSLVGVQKYMQATD-LSEAFQEAVLREA 487
K++ + S C T+ K+K+K+L S DAL+ ++GV + + + L+ A E+VL++
Sbjct: 4300 KEELKMVNSICSVTLDKIKEKLLSKSLQDALRIVMIGVSNHFPSFEALNLAQIESVLKDI 4359
Query: 488 SRH 496
S++
Sbjct: 4360 SQN 4362
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 101 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 247
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 314 KKQKLFLMSWCPDTVKVKKKMLYSSSFD 397
+ ++FL++ P +V +KM++ S+FD
Sbjct: 559 RNSRVFLVTMSPTHTRVDRKMMFHSNFD 586
>06_03_1458 +
30301585-30301775,30302131-30302245,30302345-30302430,
30302552-30302662,30303154-30303208,30303327-30303437,
30304347-30304403,30304847-30305016,30305103-30305210,
30305643-30305716,30305757-30305779,30306188-30306283,
30306502-30306582,30306934-30307068,30307162-30307227,
30307283-30307297
Length = 497
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 317 SC*PPTCPGTGACIQSQTGHICIPR 243
SC PP G + I SQ H+ IP+
Sbjct: 248 SCWPPELAGKQSLINSQVNHVQIPK 272
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 137 NDASCPS*SPRKWSCKRPKLSHQTPFFDVIHVKITPLTSPTPRQ 6
++ S P +P K +PKL ++P + + + P TSPT Q
Sbjct: 161 SEDSTPKETPPKAEETKPKLEEKSPKAEPPKMPLPPKTSPTEPQ 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,228,987
Number of Sequences: 37544
Number of extensions: 228515
Number of successful extensions: 821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -