Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1641
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.   268   3e-72
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.   268   3e-72
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...   268   3e-72
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...   268   3e-72
AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA...   163   1e-40
AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p pro...    35   0.054
AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin pr...    35   0.054
AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA...    35   0.054
AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    31   0.66 
AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p pro...    31   0.66 
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    31   0.66 
AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-P...    31   0.66 
AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-P...    31   0.66 
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    31   0.66 
AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA...    29   2.7  
AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymera...    29   2.7  

>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  268 bits (657), Expect = 3e-72
 Identities = 124/138 (89%), Positives = 131/138 (94%)
 Frame = +2

Query: 62  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 241
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
            GECRYGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDT KVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 422 VQKYMQATDLSEAFQEAV 475
           VQKY+QATDLSEA +EAV
Sbjct: 121 VQKYIQATDLSEASREAV 138


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  268 bits (657), Expect = 3e-72
 Identities = 124/138 (89%), Positives = 131/138 (94%)
 Frame = +2

Query: 62  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 241
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
            GECRYGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDT KVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 422 VQKYMQATDLSEAFQEAV 475
           VQKY+QATDLSEA +EAV
Sbjct: 121 VQKYIQATDLSEASREAV 138


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score =  268 bits (657), Expect = 3e-72
 Identities = 124/138 (89%), Positives = 131/138 (94%)
 Frame = +2

Query: 62  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 241
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
            GECRYGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDT KVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 422 VQKYMQATDLSEAFQEAV 475
           VQKY+QATDLSEA +EAV
Sbjct: 121 VQKYIQATDLSEASREAV 138


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score =  268 bits (657), Expect = 3e-72
 Identities = 124/138 (89%), Positives = 131/138 (94%)
 Frame = +2

Query: 62  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 241
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
            GECRYGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDT KVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 422 VQKYMQATDLSEAFQEAV 475
           VQKY+QATDLSEA +EAV
Sbjct: 121 VQKYIQATDLSEASREAV 138


>AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA
           protein.
          Length = 148

 Score =  163 bits (396), Expect = 1e-40
 Identities = 71/138 (51%), Positives = 98/138 (71%)
 Frame = +2

Query: 62  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 241
           MASG+ +S  C+  +E+I+K K+HRY VF I+DE++I VE +G R A Y+ FL DLQ+ G
Sbjct: 1   MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQRAG 60

Query: 242 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKKKMLYSSSFDALKKSLVG 421
           + +CR+ ++D+EY HQCQGT     K+KL LM WCP   ++K KMLYSS+F  LK+   G
Sbjct: 61  SNQCRFAVYDYEYQHQCQGTLSTCLKEKLILMLWCPTLARIKDKMLYSSTFAVLKREFPG 120

Query: 422 VQKYMQATDLSEAFQEAV 475
           VQK +QAT+  EA + AV
Sbjct: 121 VQKCIQATEPEEACRNAV 138


>AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p
           protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 332 LMSWCPDTVKVKKKMLYSSSFDALKKSL--VGVQKYMQATDLSEAFQEAVLR 481
           L+SW PDT  +++KM+Y+S+   LK       + + + AT L E   E   R
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRR 136


>AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin
           protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 332 LMSWCPDTVKVKKKMLYSSSFDALKKSL--VGVQKYMQATDLSEAFQEAVLR 481
           L+SW PDT  +++KM+Y+S+   LK       + + + AT L E   E   R
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRR 136


>AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA
           protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 332 LMSWCPDTVKVKKKMLYSSSFDALKKSL--VGVQKYMQATDLSEAFQEAVLR 481
           L+SW PDT  +++KM+Y+S+   LK       + + + AT L E   E   R
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRR 136


>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = +2

Query: 191 ERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKK 370
           +R  + E  LE +Q G     R+G  D      C  T+   +K K F M       KVKK
Sbjct: 633 KRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKK 692

Query: 371 KMLYSSSFDALKKSLVGVQK 430
              +     AL+K L+  +K
Sbjct: 693 S--FKDKQQALRKHLLHQKK 710


>AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p
           protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 80  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECR 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = +2

Query: 191 ERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKK 370
           +R  + E  LE +Q G     R+G  D      C  T+   +K K F M       KVKK
Sbjct: 633 KRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKK 692

Query: 371 KMLYSSSFDALKKSLVGVQK 430
              +     AL+K L+  +K
Sbjct: 693 S--FKDKQQALRKHLLHQKK 710


>AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-PB,
           isoform B protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 80  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECR 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-PA,
           isoform A protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 80  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECR 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = +2

Query: 191 ERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTVKVKK 370
           +R  + E  LE +Q G     R+G  D      C  T+   +K K F M       KVKK
Sbjct: 633 KRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKK 692

Query: 371 KMLYSSSFDALKKSLVGVQK 430
              +     AL+K L+  +K
Sbjct: 693 S--FKDKQQALRKHLLHQKK 710


>AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA
            protein.
          Length = 2236

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +2

Query: 104  YEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT 283
            Y E++KDK++    + IRDE  I  E  G   A      +  ++G   + RY +F+F+ T
Sbjct: 908  YHELRKDKENNLPKYDIRDENSIFFEVDGPYLAMVLPAAK--EEGKKLKKRYAVFNFDGT 965


>AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymerase
            epsilon protein.
          Length = 2220

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +2

Query: 104  YEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT 283
            Y E++KDK++    + IRDE  I  E  G   A      +  ++G   + RY +F+F+ T
Sbjct: 908  YHELRKDKENNLPKYDIRDENSIFFEVDGPYLAMVLPAAK--EEGKKLKKRYAVFNFDGT 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,145,951
Number of Sequences: 53049
Number of extensions: 378950
Number of successful extensions: 1280
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)