Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1640
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 206 4e-54
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 161 8e-41
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 156 4e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 146 4e-36
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 128 9e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 111 1e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 95 8e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 71 2e-13
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 59 6e-10
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 27 4.1
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 7.2
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 7.2
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 7.2
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 9.6
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 206 bits (502), Expect = 4e-54
Identities = 102/171 (59%), Positives = 119/171 (69%)
Frame = +1
Query: 211 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 390
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 391 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 570
NFMIQ +SIYG RF DENFKL H G LSMANAG D+NGSQFFITTV
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTV 140
Query: 571 KTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTGSCS 723
KTPWLDG HVVFG+VL G D+V+KI T D+P++DV I K+G S
Sbjct: 141 KTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKI--IKSGQLS 189
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 161 bits (392), Expect = 8e-41
Identities = 82/154 (53%), Positives = 97/154 (62%)
Frame = +1
Query: 241 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 420
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 421 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHV 600
+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HV
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125
Query: 601 VFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 702
VFG+V EGMDVV+K+E G+N + ++ D
Sbjct: 126 VFGEVTEGMDVVKKVES--LGSNSGATRARIVID 157
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 156 bits (378), Expect = 4e-39
Identities = 90/168 (53%), Positives = 105/168 (62%), Gaps = 4/168 (2%)
Frame = +1
Query: 232 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 399
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 400 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 579
M+Q SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV TP
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 580 WLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTGSCS 723
LDG+HVVFGKV++G V+ IE T ND PV VVI + G+C+
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVVIEE--CGTCT 168
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 146 bits (353), Expect = 4e-36
Identities = 83/163 (50%), Positives = 98/163 (60%), Gaps = 9/163 (5%)
Frame = +1
Query: 235 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 390
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 391 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 567
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 568 VKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 696
V +LDG+HVVFG+V+EG D+V++IE T GAN RP +V I
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 128 bits (309), Expect = 9e-31
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = +1
Query: 265 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 444
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 445 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 621
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVS 124
Query: 622 GMDVVQKIEMTVTGANDRPVKDVVI 696
G+ V +++ + T ++DRP++ + I
Sbjct: 125 GLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 111 bits (266), Expect = 1e-25
Identities = 64/143 (44%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = +1
Query: 271 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 450
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 451 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 627
I+ + FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 628 DVVQKIEMTVTGANDRPVKDVVI 696
DVV +IE T DRP++ I
Sbjct: 580 DVVHRIEQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 95.5 bits (227), Expect = 8e-21
Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +1
Query: 265 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 444
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 445 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 621
+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG 398
Query: 622 GMDVVQKIEMTVTGANDRPVKDVVISD 702
G++V+ +E T +ND P + + D
Sbjct: 399 GLNVLDALEKVPTNSNDHPKLPIKLED 425
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 70.9 bits (166), Expect = 2e-13
Identities = 53/139 (38%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +1
Query: 271 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 450
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ES 77
Query: 451 IYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EG 624
IYGE F E +L+ G + MA + N SQFFIT TP +G+ +FG+V+ +
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDT 137
Query: 625 MDVVQKIEMTVTGANDRPV 681
+ V +I AN RPV
Sbjct: 138 IYNVVRISELELDANQRPV 156
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 59.3 bits (137), Expect = 6e-10
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Frame = +1
Query: 259 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 438
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 439 XXRSIY-----GERFEDENFK--LKHYGAGWLSMANA---GKDTN----GSQFFIT-TVK 573
R ++ G RF F L H G +SM+ A +D GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 574 TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 705
LD R+ ++G+V EG D + KI + +P +D+ I T
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKHT 166
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 732 KGSATTSSFRVRYNNIF-DWAIIRTRNSHLNFLYNIHSF*NFTENNMSAI*PGCLNSCDE 556
K S T R YN I + AI+R+ + +++ F + ++ I CL D+
Sbjct: 485 KASEPTRFIRYIYNRIMLENAIVRSAAVSALTKFGLNAEDKFVQRSVKVILTRCLEDADD 544
Query: 555 KLRSICVFA 529
++R F+
Sbjct: 545 EVRDRAAFS 553
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 447 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 295
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 257 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 114
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 129 FSSFPCYFYKIRFECLFFQNLRY 61
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 9.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 85 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 237
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,224,608
Number of Sequences: 5004
Number of extensions: 66908
Number of successful extensions: 183
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -