Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1635
         (407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   3.2  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   4.3  
AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    23   5.7  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   7.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   9.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 294 GLGSSW*HHRHNHAPQTEP 238
           G GS   HH H+HA Q  P
Sbjct: 813 GAGSHHLHHLHHHAAQQPP 831


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 246 SGVRGCVDGVTSCYRAPLPGHYRHGRHQE 332
           SG   CV GV  C R P P     GR+ E
Sbjct: 561 SGRGQCVCGVCVCERRPNPDELIDGRYCE 589


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 263 CRWCYQLLPSPSTWTL*T 316
           C+WC +++PS  T  L T
Sbjct: 204 CQWCRKVIPSHQTGILGT 221


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +2

Query: 257 WLCRWCYQLLPSPSTWTL*TWPPSGGC 337
           W     Y+ +P P+ W L      GGC
Sbjct: 34  WASAKPYKSIPGPTLWQLFRGFSKGGC 60


>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 18  VFAREQSFVQVLAVISKTK*NSENIDSLYR 107
           +FAR + +++ +     T+   E ID+LYR
Sbjct: 109 LFARFRFYLEPILYYGATETPQEKIDNLYR 138


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 266 RWCYQLLPSPSTW 304
           RW Y+L+P  + W
Sbjct: 865 RWTYRLIPDVNRW 877


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 273 HHRHNHAPQTE 241
           HH H H PQ +
Sbjct: 311 HHHHQHQPQQQ 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,043
Number of Sequences: 2352
Number of extensions: 7352
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)