Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1635
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro...    27   9.5  
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ...    27   9.5  

>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
           protein.
          Length = 1203

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 273 HHRHNHAPQTEP 238
           HH HNH PQ +P
Sbjct: 4   HHNHNHLPQQQP 15


>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
           protein.
          Length = 1203

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 273 HHRHNHAPQTEP 238
           HH HNH PQ +P
Sbjct: 4   HHNHNHLPQQQP 15


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,514,617
Number of Sequences: 53049
Number of extensions: 346615
Number of successful extensions: 833
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)