Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1634
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p pro...    27   6.4  
AE014298-1946|AAO41651.1|  913|Drosophila melanogaster CG32627-P...    27   6.4  
AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-P...    27   6.4  
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P...    27   6.4  

>AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p
           protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 150 YSVIMSKGGSSFGARRGSHSRGQ 82
           Y++  S GGSS G+R+G+H   Q
Sbjct: 840 YTIEASFGGSSLGSRKGTHFNTQ 862


>AE014298-1946|AAO41651.1|  913|Drosophila melanogaster CG32627-PC,
           isoform C protein.
          Length = 913

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 150 YSVIMSKGGSSFGARRGSHSRGQ 82
           Y++  S GGSS G+R+G+H   Q
Sbjct: 816 YTIEASFGGSSLGSRKGTHFNTQ 838


>AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-PB,
           isoform B protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 150 YSVIMSKGGSSFGARRGSHSRGQ 82
           Y++  S GGSS G+R+G+H   Q
Sbjct: 840 YTIEASFGGSSLGSRKGTHFNTQ 862


>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
            isoform A protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 150  YSVIMSKGGSSFGARRGSHSRGQ 82
            Y++  S GGSS G+R+G+H   Q
Sbjct: 1104 YTIEASFGGSSLGSRKGTHFNTQ 1126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,204
Number of Sequences: 53049
Number of extensions: 231510
Number of successful extensions: 371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)