Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1629
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52657 Cluster: Transcription initiation factor IIA gam... 170 3e-41
UniRef50_A2XZI2 Cluster: Transcription initiation factor IIA gam... 122 1e-26
UniRef50_Q1EMR2 Cluster: Transcription initiation factor; n=12; ... 116 8e-25
UniRef50_Q9W5B9 Cluster: Transcription initiation factor IIA gam... 115 1e-24
UniRef50_Q9NEX2 Cluster: Probable transcription initiation facto... 113 4e-24
UniRef50_Q2UD99 Cluster: Transcription initiation factor IIA; n=... 110 4e-23
UniRef50_Q9BIB4 Cluster: Transcription initiation factor IIA sma... 107 3e-22
UniRef50_O74948 Cluster: Probable transcription initiation facto... 106 6e-22
UniRef50_UPI0000E4A8EC Cluster: PREDICTED: similar to putative T... 104 2e-21
UniRef50_Q01FA7 Cluster: Transcription factor IIA small subunit;... 92 1e-17
UniRef50_Q5KEI0 Cluster: Transcription initiation factor iia sma... 92 1e-17
UniRef50_Q6C0S4 Cluster: Similar to wi|NCU09748.1 Neurospora cra... 89 1e-16
UniRef50_P32774 Cluster: Transcription initiation factor IIA sma... 86 7e-16
UniRef50_Q4P891 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q8SSH6 Cluster: TRANSCRIPTION INITIATION FACTOR IIA; n=... 56 6e-07
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 53 6e-06
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 53 6e-06
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 53 6e-06
UniRef50_Q9XG36 Cluster: Transcription initiation factor IIA gam... 51 2e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 48 2e-04
UniRef50_Q5CQ44 Cluster: Transcription initiation factor IIA; n=... 38 0.32
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 37 0.56
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.98
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 36 0.98
UniRef50_A0CVR0 Cluster: Chromosome undetermined scaffold_29, wh... 36 1.3
UniRef50_Q8I605 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_A2DCB5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q96X97 Cluster: 1062aa long hypothetical thermopsin; n=... 35 2.3
UniRef50_Q500A4 Cluster: Putative uncharacterized protein; n=7; ... 34 3.9
UniRef50_Q7RP53 Cluster: Arabidopsis thaliana At5g28850/F7P1_30;... 34 3.9
UniRef50_Q8ILC5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.2
UniRef50_Q8WZQ6 Cluster: Putative uncharacterized protein G15G9.... 33 6.9
UniRef50_Q6BUR5 Cluster: Similar to sp|P06197 Saccharomyces cere... 33 6.9
UniRef50_O48520 Cluster: DNA polymerase delta small subunit; n=7... 33 6.9
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 33 9.1
UniRef50_Q7R8Q8 Cluster: Putative uncharacterized protein PY0716... 33 9.1
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 9.1
>UniRef50_P52657 Cluster: Transcription initiation factor IIA gamma
chain; n=29; Eumetazoa|Rep: Transcription initiation
factor IIA gamma chain - Homo sapiens (Human)
Length = 109
Score = 170 bits (413), Expect = 3e-41
Identities = 80/103 (77%), Positives = 93/103 (90%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
M+YQLYRNTT+GN+LQESLDELIQ QITP LA++VLLQFDK+IN AL+ RV++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>UniRef50_A2XZI2 Cluster: Transcription initiation factor IIA gamma
chain; n=4; Eukaryota|Rep: Transcription initiation
factor IIA gamma chain - Oryza sativa subsp. indica
(Rice)
Length = 106
Score = 122 bits (293), Expect = 1e-26
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = +1
Query: 97 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 276
+++LYR +TIG L E+LDE++ G ++P LA++VL+QFDKS+ +AL N+VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-G 61
Query: 277 KLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK 399
L+TYRFCDNVWTF+L + F+ + +V KVKIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSK 102
>UniRef50_Q1EMR2 Cluster: Transcription initiation factor; n=12;
Magnoliophyta|Rep: Transcription initiation factor -
Plantago major (Common plantain)
Length = 114
Score = 116 bits (278), Expect = 8e-25
Identities = 51/104 (49%), Positives = 78/104 (75%)
Frame = +1
Query: 88 TVMSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTF 267
T+ +++LYR +TIG L E+LD+++ G ++P LA++VL+QFDKS+ +AL + VKS+++
Sbjct: 8 TMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSI 67
Query: 268 KAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK 399
K G L+TYRFCDNVWTF++ + + + + VE VKIVACD K
Sbjct: 68 K-GHLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSK 110
>UniRef50_Q9W5B9 Cluster: Transcription initiation factor IIA
gamma-2 chain; n=12; Eukaryota|Rep: Transcription
initiation factor IIA gamma-2 chain - Drosophila
melanogaster (Fruit fly)
Length = 107
Score = 115 bits (276), Expect = 1e-24
Identities = 55/101 (54%), Positives = 73/101 (72%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
M+YQ YR TT+G TLQ++LDE+++ G IT +A VLL++DKSI+ AL + S ++F A
Sbjct: 1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTA 60
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDG 396
+L T+R CDNVWT +L D EFRE Q KV+ VKIVAC G
Sbjct: 61 ERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101
>UniRef50_Q9NEX2 Cluster: Probable transcription initiation factor
IIA gamma chain; n=2; Caenorhabditis|Rep: Probable
transcription initiation factor IIA gamma chain -
Caenorhabditis elegans
Length = 113
Score = 113 bits (272), Expect = 4e-24
Identities = 47/101 (46%), Positives = 74/101 (73%)
Frame = +1
Query: 97 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 276
+YQLYRNTT+G LQ++LD+ + I +L+ K++ FDKSIN+ L ++ K+++ F+A
Sbjct: 5 NYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRAD 64
Query: 277 KLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK 399
KL YR+CDNVWTF++ ++ R+ E V+++KIVACDG+
Sbjct: 65 KLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQ 105
>UniRef50_Q2UD99 Cluster: Transcription initiation factor IIA; n=17;
Ascomycota|Rep: Transcription initiation factor IIA -
Aspergillus oryzae
Length = 112
Score = 110 bits (264), Expect = 4e-23
Identities = 50/101 (49%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+LYR +++G +L ++LD+LI G+I P LA+K+L FD+ I + L+++V++RLTFK G
Sbjct: 8 YELYRGSSLGLSLTDTLDDLINDGRIEPQLAMKILSTFDRVITEVLADKVRARLTFK-GH 66
Query: 280 LNTYRFCDNVWTFMLNDVEFR-EVQELAKVEKVKIVACDGK 399
L+TYRFCD VWTF++ DV F+ + Q + +KVKIV+C+ K
Sbjct: 67 LDTYRFCDEVWTFLIKDVTFKLDNQTTVQADKVKIVSCNSK 107
>UniRef50_Q9BIB4 Cluster: Transcription initiation factor IIA small
chain homolog; n=2; Caenorhabditis|Rep: Transcription
initiation factor IIA small chain homolog -
Caenorhabditis elegans
Length = 139
Score = 107 bits (256), Expect = 3e-22
Identities = 49/103 (47%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = +1
Query: 97 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 276
SY LYR TT+G L ++L+++ G +T +LA KVL QFDKS+N+ +S K ++ F A
Sbjct: 3 SYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCAT 62
Query: 277 KLNTYRFCDNVWTFMLNDVEFREVQEL--AKVEKVKIVACDGK 399
+L TYR+CDNVWTF+LN+V ++ Q ++K+K+VACDG+
Sbjct: 63 QLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGR 105
>UniRef50_O74948 Cluster: Probable transcription initiation factor
IIA small chain; n=2; Ascomycota|Rep: Probable
transcription initiation factor IIA small chain -
Schizosaccharomyces pombe (Fission yeast)
Length = 107
Score = 106 bits (254), Expect = 6e-22
Identities = 51/97 (52%), Positives = 71/97 (73%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+LYR + I +L ++LD+LI G+I+P LA+KVL FDKS+ +AL+ +V+SRLTFK G
Sbjct: 5 YELYRRSRI--SLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFK-GH 61
Query: 280 LNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVAC 390
L+TYRFCD VWTF++ + FR E K++IVAC
Sbjct: 62 LDTYRFCDEVWTFIIKNPSFRFDNETVTSNKIRIVAC 98
>UniRef50_UPI0000E4A8EC Cluster: PREDICTED: similar to putative
TFIIA gamma chain, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to putative TFIIA
gamma chain, partial - Strongylocentrotus purpuratus
Length = 84
Score = 104 bits (249), Expect = 2e-21
Identities = 49/75 (65%), Positives = 63/75 (84%)
Frame = +1
Query: 175 ITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQE 354
ITP LA+ VLL+FD++IN AL+NR+K++++FK G LNTYRFCDNVWTF+LNDV+FR +
Sbjct: 4 ITPQLALNVLLKFDRAINDALANRLKNKISFK-GHLNTYRFCDNVWTFVLNDVDFRN-GD 61
Query: 355 LAKVEKVKIVACDGK 399
V+KVKIVA DGK
Sbjct: 62 FVTVDKVKIVAVDGK 76
>UniRef50_Q01FA7 Cluster: Transcription factor IIA small subunit;
n=2; Ostreococcus|Rep: Transcription factor IIA small
subunit - Ostreococcus tauri
Length = 113
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/107 (41%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
MS +LYR +TIG +L ++LDE++ G ++P++A+KVL +FD+ + + L K++ + K
Sbjct: 1 MSLELYRRSTIGMSLTDALDEMVNSGVLSPSIAMKVLFEFDRCVTRVL-QASKTKASIK- 58
Query: 274 GKLNTYRFCDNVWTFMLND-----VEFREVQELAKVEKVKIVACDGK 399
G+L+TYRFC NVWTF++ D + ++V+ +K+VACDGK
Sbjct: 59 GQLHTYRFCGNVWTFIVEDAVVNVTDTDSTSRESRVKLLKVVACDGK 105
>UniRef50_Q5KEI0 Cluster: Transcription initiation factor iia small
chain, putative; n=1; Filobasidiella neoformans|Rep:
Transcription initiation factor iia small chain,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 127
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+ R+ IG L ++LDELI G I P LA++VL QFDKS+ + L VK++ T K G
Sbjct: 11 YRGSRHVHIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK-GH 69
Query: 280 LNTYRFCDNVWTFMLNDVEFR-----EVQELAKVEKVKIVACDGKNVDD 411
L+TYR CD+VWTF++ D +F+ E+ K+KIVAC + D
Sbjct: 70 LSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKSGDAAD 118
>UniRef50_Q6C0S4 Cluster: Similar to wi|NCU09748.1 Neurospora crassa
NCU09748. 1 hypothetical protein; n=1; Yarrowia
lipolytica|Rep: Similar to wi|NCU09748.1 Neurospora
crassa NCU09748. 1 hypothetical protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 111
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/105 (40%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y +YR ++IG L E+LDELI+ I P LA+KV+ FD+ + L N V++R++FK G+
Sbjct: 7 YNIYRVSSIGTALTEALDELIRDSTIPPQLALKVVEVFDRVMADTLRNDVRNRMSFK-GE 65
Query: 280 LNTYRFCDNVWTFMLNDVEFR-EVQELAKVEKVKIVACDGKNVDD 411
L+TYR ++VWTF++ V F+ + ++ +K+KIV C+ + D
Sbjct: 66 LHTYRGLEDVWTFIIRRVVFKMDNNDVVNADKIKIVTCNARKAGD 110
>UniRef50_P32774 Cluster: Transcription initiation factor IIA small
subunit; n=10; Saccharomycetales|Rep: Transcription
initiation factor IIA small subunit - Saccharomyces
cerevisiae (Baker's yeast)
Length = 122
Score = 86.2 bits (204), Expect = 7e-16
Identities = 46/114 (40%), Positives = 72/114 (63%), Gaps = 14/114 (12%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+LYR +TIGN+L ++LD LI G+I +LA++VL FDK + + L + +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 280 LNTYRFCDNVWTFMLNDVEFR--------------EVQELAKVEKVKIVACDGK 399
L+TY FCD+VWTF++ + + + Q + V+K++IVAC+ K
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSK 119
>UniRef50_Q4P891 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 155
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+LYR ++IG L ++LDELIQ G I P LA++VL +FDK+I L+ VK++ K
Sbjct: 12 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKAIATNLAKNVKAKSQLKVRL 71
Query: 280 LNTYRFC 300
L + C
Sbjct: 72 LPSALAC 78
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 241 NRVKSRLTFKA--GKLNTYRFCDNVWTFMLNDVEFR-EVQELAKVEKVKIVAC 390
+RV+S F G L YR C+ VWTF + + + + E+ V+KVKIVAC
Sbjct: 95 HRVRSTSLFALDQGHLKDYRLCEEVWTFRVRNATLKLDNAEILDVDKVKIVAC 147
>UniRef50_Q8SSH6 Cluster: TRANSCRIPTION INITIATION FACTOR IIA; n=1;
Encephalitozoon cuniculi|Rep: TRANSCRIPTION INITIATION
FACTOR IIA - Encephalitozoon cuniculi
Length = 113
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 YQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK 279
Y+ YR +G L++ +DE + ++P +L FD S+ + V + ++FK GK
Sbjct: 2 YEFYRQLMVGKVLEKIVDEKVNANVLSPNQGKHILETFDLSVPIVFNKSVTNSMSFK-GK 60
Query: 280 LNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK-NVDDRR 417
++ Y D VW F E +V IVACD N+D R
Sbjct: 61 VDFYNHVDGVWRFQTTGFVMSLNNEYFNAGEVNIVACDADINMDAGR 107
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 636 KTPGVTQLNRLAAHPPFASWRNSE 707
+ PGVTQLNRLAAHPPFASWRNSE
Sbjct: 78 ENPGVTQLNRLAAHPPFASWRNSE 101
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 636 KTPGVTQLNRLAAHPPFASWRNSE 707
+ PGVTQLNRLAAHPPFASWRNSE
Sbjct: 32 ENPGVTQLNRLAAHPPFASWRNSE 55
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 636 KTPGVTQLNRLAAHPPFASWRNSE 707
+ PGVTQLNRLAAHPPFASWRNSE
Sbjct: 36 ENPGVTQLNRLAAHPPFASWRNSE 59
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 636 KTPGVTQLNRLAAHPPFASWRNSE 707
+ PGVTQLNRLAAHPPFASWRNSE
Sbjct: 18 ENPGVTQLNRLAAHPPFASWRNSE 41
>UniRef50_Q9XG36 Cluster: Transcription initiation factor IIA gamma
chain; n=1; Guillardia theta|Rep: Transcription
initiation factor IIA gamma chain - Guillardia theta
(Cryptomonas phi)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
M++ + +T+G L E+L EL+ I + + ++F + +L ++K + K
Sbjct: 1 MTFWHFNVSTVGIELNETLHELLIANVINQDILNIIKMEFQVAFLSSLKKKIKDKPILK- 59
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKV---EKVKIVACDGKN 402
GKL Y+ CDNVW F + + E + + + +KIVA D KN
Sbjct: 60 GKLLHYQNCDNVWMFFVTNPEIKNNNYSLPINLKKPLKIVAYDNKN 105
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 634 GKPLALPNLIALQHIPLSPAGVIA 705
GK LALPNLIALQHIPLSPAGVI+
Sbjct: 15 GKTLALPNLIALQHIPLSPAGVIS 38
Score = 36.3 bits (80), Expect = 0.74
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 603 HWPSFYNVVTGKTPGVTQLNRLAAHP 680
HWPSFYNVVTGKT + L L P
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIP 30
>UniRef50_Q5CQ44 Cluster: Transcription initiation factor IIA; n=1;
Cryptosporidium parvum Iowa II|Rep: Transcription
initiation factor IIA - Cryptosporidium parvum Iowa II
Length = 111
Score = 37.5 bits (83), Expect = 0.32
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 124 IGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA-GKLNTYRFC 300
IG + L+E + +I+P+ + K++ + +S ++ L VKS K G ++ Y
Sbjct: 14 IGKSFVVLLNEFVNDRRISPSQSTKMIENYIESCSEILKKHVKSGRKLKCEGAISHYNCI 73
Query: 301 DNVWTFMLNDVEFREVQELAKVEKVKIVACDGKNV 405
D W ++ D+ + L +V K K V GK V
Sbjct: 74 DGKWDLVIKDLVIFG-KSLGRV-KSKYVKVSGKEV 106
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 36.7 bits (81), Expect = 0.56
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 636 KTPGVTQLNRLAAHPPFASWRNSE 707
+ P +TQ +RL AHPPF SWR+ E
Sbjct: 25 ENPQITQYHRLEAHPPFHSWRDVE 48
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 35.9 bits (79), Expect = 0.98
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 552 KGGARYPIRPIVSRIT 599
+GGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 35.9 bits (79), Expect = 0.98
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 603 HWPSFYNVVTGK---TPGVTQLNRLAAHPPFASWRN 701
H P F+ V+ + +T LNRL AHP FASWR+
Sbjct: 10 HTPDFHAVLAREDWHNQTITHLNRLPAHPVFASWRD 45
>UniRef50_A0CVR0 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 416
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/89 (22%), Positives = 44/89 (49%)
Frame = -3
Query: 543 HLHLFSN*IPNTMTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVVNIFTITCYYFNFFH 364
H H F + +PN + + I ++ + ++K +KL +Y++ +I+ + N
Sbjct: 281 HEH-FKDILPNKIINSIQEIGDMPKDKLFEIMKKTKLHAYQIKRAYSIYQYA--FVNKKS 337
Query: 363 LGQFLYFSKFNIIQHKSPYIITKPVCVKF 277
F+++ + +H+ PYI K + V+F
Sbjct: 338 SKLMTEFARYLLREHQKPYIRKKNILVRF 366
>UniRef50_Q8I605 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1089
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 208 QFDKSINQALSNRVKSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVK 378
Q +K + + NR+ +RL + K NTY DN + + N E +++Q++ K++KV+
Sbjct: 992 QKNKKNKKNVHNRMDTRLNLRNNKTNTY---DNSFEY-YNQAEMQKIQKIQKIQKVE 1044
>UniRef50_A2DCB5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 378
Score = 34.7 bits (76), Expect = 2.3
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -3
Query: 507 MTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVVNIFTITCYYFNFFHLGQFLYFSKFNI 328
+TK Y N ++ F + S IK KL +Y N F+ F+ F L F+ KF +
Sbjct: 164 LTKYYKNFQDVFLFQINSSIKDPKLTAYTSKYCQNTFS----GFS-FRLESFINKYKFGV 218
Query: 327 IQHKSPY 307
+ SPY
Sbjct: 219 LHPYSPY 225
>UniRef50_Q96X97 Cluster: 1062aa long hypothetical thermopsin; n=1;
Sulfolobus tokodaii|Rep: 1062aa long hypothetical
thermopsin - Sulfolobus tokodaii
Length = 1062
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -3
Query: 579 GELGTGPPLFKYHLHLFSN*I--PNTMTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVV 406
G +G PP Y+ I PNT+ +Y++ + S ++ S + I+Y S V
Sbjct: 613 GGVGYSPPQVTYYYFGLPQTITAPNTVWVDYDS-TYVYSQTLPSSSSQERWIAYSYSGTV 671
Query: 405 NI-FTITCYYFNFFHL 361
+ TIT YY+N +H+
Sbjct: 672 TVPSTITIYYYNQYHI 687
>UniRef50_Q500A4 Cluster: Putative uncharacterized protein; n=7;
Pseudomonas syringae group|Rep: Putative uncharacterized
protein - Pseudomonas syringae pv. syringae (strain
B728a)
Length = 247
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = -3
Query: 507 MTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVVNIF 397
+TK Y N EI S+S++++ +PSK I + A+++I+
Sbjct: 26 ITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIISIY 62
>UniRef50_Q7RP53 Cluster: Arabidopsis thaliana At5g28850/F7P1_30;
n=7; Plasmodium (Vinckeia)|Rep: Arabidopsis thaliana
At5g28850/F7P1_30 - Plasmodium yoelii yoelii
Length = 988
Score = 33.9 bits (74), Expect = 3.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 202 LLQFDK-SINQALSNRVKSRLTFKAGKLNTYRFCDNVWTFMLNDVE 336
L +FD S+N + NR+ SR++ K G N C N W + L + E
Sbjct: 785 LYRFDNHSLNDFIVNRIWSRISIKLGGPNQKYMCLNDWIYFLTNYE 830
>UniRef50_Q8ILC5 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Plasmodium falciparum (isolate 3D7)
Length = 2700
Score = 33.5 bits (73), Expect = 5.2
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = -3
Query: 552 FKYHLHLFSN*IPNTMTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVVNIFTITCYYFN 373
F Y ++ SN P+ ++KNY N+ ++F+ + S I ++ +++ ++ Y N
Sbjct: 1570 FLYLAYICSNSFPDNISKNYKNL-LFKNFNFNEIWLTSHQI--KIKIFISLMYMSLYEIN 1626
Query: 372 FFHLGQFLYFSKFNIIQHK 316
+LG+F + II H+
Sbjct: 1627 SMNLGEF-FMEILKIILHR 1644
>UniRef50_Q8WZQ6 Cluster: Putative uncharacterized protein
G15G9.050; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein G15G9.050 - Neurospora crassa
Length = 285
Score = 33.1 bits (72), Expect = 6.9
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 175 ITPALAVKVLLQFDKSINQALS--NRVKSRLTF--KAGKLNTYRFCDNVWTFMLNDVE 336
+T L VL FD+ I Q L+ + V +++ GKL YR D++W + DVE
Sbjct: 121 LTQKLTDHVLTTFDRVIAQTLATHDEVINKIPVIKMKGKLKQYRLVDDIWKLWVEDVE 178
>UniRef50_Q6BUR5 Cluster: Similar to sp|P06197 Saccharomyces
cerevisiae YPR113w PIS1; n=4; Saccharomycetales|Rep:
Similar to sp|P06197 Saccharomyces cerevisiae YPR113w
PIS1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 225
Score = 33.1 bits (72), Expect = 6.9
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = -3
Query: 555 LFKYHLHLFSN*IPNTMTKNYNNINEIQSFSVRSLIKPSKLISYRLSAVVNIFTITCY-- 382
L +++H+++ + ++ + ++ N++E QS + SL ++ + + + V +F + Y
Sbjct: 119 LASHYIHMYA--MMSSGSASHKNVDESQS-KILSLYYTNRTVLFVVCLVNELFYVAIYLH 175
Query: 381 YFNFFHLGQFLYF 343
YF+FF LG L F
Sbjct: 176 YFDFFWLGTVLVF 188
>UniRef50_O48520 Cluster: DNA polymerase delta small subunit; n=7;
Magnoliophyta|Rep: DNA polymerase delta small subunit -
Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 33.1 bits (72), Expect = 6.9
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 130 NTLQESLDEL-IQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGK-LNTYRFCD 303
+TL E + EL I QI ++V ++ + N AL + +R F NT+R C
Sbjct: 267 STLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCT 326
Query: 304 NVWTFMLNDVEF-----REVQELAKVEKVK 378
N +F ++++ F + + +L K + K
Sbjct: 327 NPHSFDVDNIRFLGTSGQNIDDLGKYSEAK 356
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 32.7 bits (71), Expect = 9.1
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 605 LAVVLQRRDWENPWR 649
LAVVLQRRDWENP +
Sbjct: 179 LAVVLQRRDWENPMK 193
>UniRef50_Q7R8Q8 Cluster: Putative uncharacterized protein PY07162;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY07162 - Plasmodium yoelii yoelii
Length = 1473
Score = 32.7 bits (71), Expect = 9.1
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -3
Query: 420 LSAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHKSPYIITKPVCVKFSCFK 265
LS V I+T YF F H Q Y K+NI++ K II++ + KF+ K
Sbjct: 558 LSKKVQIYTNGILYFEFMHNKQMDYIKKWNILKLKKE-IISEIINKKFNINK 608
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 32.7 bits (71), Expect = 9.1
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = +3
Query: 555 GGARYPIRPIVSRITIHWPSFYNVVTGKTPGVTQLNRLAAHPPF 686
GGAR PI P I +F GK PG QLN L A P F
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLF 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,588,414
Number of Sequences: 1657284
Number of extensions: 11810915
Number of successful extensions: 28873
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 27900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28840
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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