Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1629
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81713-1|CAA57357.1|  109|Homo sapiens smallest subunit of TFIIA...   170   5e-42
U21242-1|AAB58247.1|  109|Homo sapiens transcription factor TFII...   170   5e-42
U14193-1|AAA64951.1|  109|Homo sapiens transcription factor IIA ...   170   5e-42
CR542192-1|CAG46989.1|  109|Homo sapiens GTF2A2 protein.              170   5e-42
BT007362-1|AAP36026.1|  109|Homo sapiens general transcription f...   170   5e-42
BC001919-1|AAH01919.1|  109|Homo sapiens general transcription f...   170   5e-42
BC000287-1|AAH00287.1|  109|Homo sapiens general transcription f...   170   5e-42
M59819-1|AAA63177.1|  771|Homo sapiens granulocyte colony-stimul...    31   5.3  

>X81713-1|CAA57357.1|  109|Homo sapiens smallest subunit of TFIIA
           protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>U21242-1|AAB58247.1|  109|Homo sapiens transcription factor TFIIA
           small subunit p12 protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>U14193-1|AAA64951.1|  109|Homo sapiens transcription factor IIA
           small 12 kDa subunit protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>CR542192-1|CAG46989.1|  109|Homo sapiens GTF2A2 protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>BT007362-1|AAP36026.1|  109|Homo sapiens general transcription
           factor IIA, 2, 12kDa protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>BC001919-1|AAH01919.1|  109|Homo sapiens general transcription
           factor IIA, 2, 12kDa protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>BC000287-1|AAH00287.1|  109|Homo sapiens general transcription
           factor IIA, 2, 12kDa protein.
          Length = 109

 Score =  170 bits (413), Expect = 5e-42
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = +1

Query: 94  MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
           M+YQLYRNTT+GN+LQESLDELIQ  QITP LA++VLLQFDK+IN AL+ RV++R+ F+ 
Sbjct: 1   MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59

Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
           G LNTYRFCDNVWTF+LNDVEFREV EL KV+KVKIVACDGKN
Sbjct: 60  GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102


>M59819-1|AAA63177.1|  771|Homo sapiens granulocyte
           colony-stimulating factor receptor protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = -1

Query: 590 THYRANWVPGPPFLNTTYI--YLVIRSQIQ*QKITTISMKFKAFQFVV*-LSLAN*FHIG 420
           T  +  WVP PP L  + +  Y +  +  Q Q  + I +   +  FV+  L  A+ +HI 
Sbjct: 541 TWAQLEWVPEPPELGKSPLTHYTIFWTNAQNQSFSAI-LNASSRGFVLHGLEPASLYHIH 599

Query: 419 YLRSSTFLPSHATILTFSTLANSCTSR 339
            + +S    +++T+LT  TL  + T R
Sbjct: 600 LMAASQAGATNSTVLTLMTLTPAPTGR 626


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,773,500
Number of Sequences: 237096
Number of extensions: 1803972
Number of successful extensions: 2744
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2737
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)