Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1629
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X83271-1|CAA58244.1| 106|Drosophila melanogaster dTFIIA-S protein. 192 4e-49
AE014297-3399|AAF56199.1| 106|Drosophila melanogaster CG5163-PA... 192 4e-49
AY113478-1|AAM29483.1| 106|Drosophila melanogaster RE44302p pro... 190 2e-48
AE014298-137|AAF45575.1| 107|Drosophila melanogaster CG11639-PA... 115 7e-26
BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p pro... 30 3.5
BT012479-1|AAS93750.1| 465|Drosophila melanogaster RE13884p pro... 30 3.5
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 30 3.5
AY069709-1|AAL39854.1| 258|Drosophila melanogaster LD48048p pro... 30 3.5
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC... 30 3.5
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB... 30 3.5
AE014134-1344|AAN10646.1| 258|Drosophila melanogaster CG14536-P... 30 3.5
AE014134-1343|AAF52560.1| 465|Drosophila melanogaster CG14536-P... 30 3.5
AY051761-1|AAK93185.1| 475|Drosophila melanogaster LD29083p pro... 29 6.2
AE014134-1859|AAF52930.2| 475|Drosophila melanogaster CG5091-PA... 29 6.2
>X83271-1|CAA58244.1| 106|Drosophila melanogaster dTFIIA-S protein.
Length = 106
Score = 192 bits (468), Expect = 4e-49
Identities = 89/103 (86%), Positives = 96/103 (93%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RVK+R+TFKA
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
>AE014297-3399|AAF56199.1| 106|Drosophila melanogaster CG5163-PA
protein.
Length = 106
Score = 192 bits (468), Expect = 4e-49
Identities = 89/103 (86%), Positives = 96/103 (93%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RVK+R+TFKA
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
>AY113478-1|AAM29483.1| 106|Drosophila melanogaster RE44302p
protein.
Length = 106
Score = 190 bits (462), Expect = 2e-48
Identities = 88/103 (85%), Positives = 95/103 (92%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQ DKSIN AL+ RVK+R+TFKA
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQLDKSINNALNQRVKARVTFKA 60
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 402
GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
>AE014298-137|AAF45575.1| 107|Drosophila melanogaster CG11639-PA
protein.
Length = 107
Score = 115 bits (276), Expect = 7e-26
Identities = 55/101 (54%), Positives = 73/101 (72%)
Frame = +1
Query: 94 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 273
M+YQ YR TT+G TLQ++LDE+++ G IT +A VLL++DKSI+ AL + S ++F A
Sbjct: 1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTA 60
Query: 274 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDG 396
+L T+R CDNVWT +L D EFRE Q KV+ VKIVAC G
Sbjct: 61 ERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101
>BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p
protein.
Length = 394
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 175 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 74
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 279 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 314
>BT012479-1|AAS93750.1| 465|Drosophila melanogaster RE13884p
protein.
Length = 465
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 FVTFSCIKTYEILLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 191
F +F+ + + +L+F L+C L + I YH R+ R + I NN +
Sbjct: 300 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 359
Query: 192 SKSFAAIRQI 221
+ +FAA++QI
Sbjct: 360 AAAFAAVQQI 369
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 175 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 74
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 405 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 440
>AY069709-1|AAL39854.1| 258|Drosophila melanogaster LD48048p
protein.
Length = 258
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 FVTFSCIKTYEILLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 191
F +F+ + + +L+F L+C L + I YH R+ R + I NN +
Sbjct: 93 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 152
Query: 192 SKSFAAIRQI 221
+ +FAA++QI
Sbjct: 153 AAAFAAVQQI 162
>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
isoform C protein.
Length = 2148
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 175 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 74
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 643 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 678
>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
isoform B protein.
Length = 2196
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 175 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 74
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 691 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 726
>AE014134-1344|AAN10646.1| 258|Drosophila melanogaster CG14536-PB,
isoform B protein.
Length = 258
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 FVTFSCIKTYEILLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 191
F +F+ + + +L+F L+C L + I YH R+ R + I NN +
Sbjct: 93 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 152
Query: 192 SKSFAAIRQI 221
+ +FAA++QI
Sbjct: 153 AAAFAAVQQI 162
>AE014134-1343|AAF52560.1| 465|Drosophila melanogaster CG14536-PA,
isoform A protein.
Length = 465
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 FVTFSCIKTYEILLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 191
F +F+ + + +L+F L+C L + I YH R+ R + I NN +
Sbjct: 300 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 359
Query: 192 SKSFAAIRQI 221
+ +FAA++QI
Sbjct: 360 AAAFAAVQQI 369
>AY051761-1|AAK93185.1| 475|Drosophila melanogaster LD29083p
protein.
Length = 475
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 16 NLLLFRVLKHTKYFYFLFNCSVI*TVMSYQLYRNTTIGNTLQESL------DELIQYGQI 177
N+LLFR + + LFN S+ + S+Q++ T + L DE+I + ++
Sbjct: 312 NVLLFRRRTNVGFLLALFNTSLAFFLFSFQVHEKTILLTALPALFLLKCWPDEMILFLEV 371
Query: 178 TPALAVKVLLQFDKSINQALSNRVKSRLTFK 270
T ++ LL D+ + A+ V L FK
Sbjct: 372 T-VFSMLPLLARDELLVPAVVATVAFHLIFK 401
>AE014134-1859|AAF52930.2| 475|Drosophila melanogaster CG5091-PA
protein.
Length = 475
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 16 NLLLFRVLKHTKYFYFLFNCSVI*TVMSYQLYRNTTIGNTLQESL------DELIQYGQI 177
N+LLFR + + LFN S+ + S+Q++ T + L DE+I + ++
Sbjct: 312 NVLLFRRRTNVGFLLALFNTSLAFFLFSFQVHEKTILLTALPALFLLKCWPDEMILFLEV 371
Query: 178 TPALAVKVLLQFDKSINQALSNRVKSRLTFK 270
T ++ LL D+ + A+ V L FK
Sbjct: 372 T-VFSMLPLLARDELLVPAVVATVAFHLIFK 401
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,326,458
Number of Sequences: 53049
Number of extensions: 528243
Number of successful extensions: 1227
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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