Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1627
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    25   3.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   3.4  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   7.9  

>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 510 FHVPDNTPYARYFLSSFLQHQVYETLCKAAVFGRRNVDEPL 388
           FH P +   A   +  FL+    +TL   AVF R  V+ PL
Sbjct: 85  FH-PSHQRVASQLIELFLEQSNPDTLTAMAVFVRDRVNGPL 124


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 309 PGHSKHWRVILKAATGIDDISGAALKRYYRPLYKILNKMVARYRI 175
           P   + WRV+L++ T +      A + YYR L  ++ +  +  R+
Sbjct: 316 PSLEQIWRVLLRSKTAVIFAVTEAQQAYYRRLSDLMPEFTSVGRL 360


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 367 PLRHLRIEDRWQDITRNNETWPLKTL 290
           P RHL I  RW+ I  ++ T  + +L
Sbjct: 466 PTRHLDIFKRWKSILASSRTDTVNSL 491


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 854,434
Number of Sequences: 2352
Number of extensions: 19375
Number of successful extensions: 111
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)