Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1627
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    40   0.003
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso...    32   0.39 
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso...    32   0.39 
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor...    32   0.39 
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor...    32   0.39 
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor...    32   0.39 
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor...    32   0.39 
AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical...    31   0.90 
U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U00032-12|AAA50629.1|  482|Caenorhabditis elegans Hypothetical p...    28   8.4  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
            converting enzyme)-like non-peptidase protein 1, isoform
            a protein.
          Length = 906

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 1/150 (0%)
 Frame = -2

Query: 609  SNLNGDFWDMALELQGIVPPVYRGEDYFDAGAKFHVPD-NTPYARYFLSSFLQHQVYETL 433
            + LN  +W++  + +G+  P        DA     V   ++P  R  +S  L+ Q+ + L
Sbjct: 630  NKLNDRWWEIRNKYEGVRSPQPYNTSNLDALIHNSVSQVHSPATRTLISYVLKFQILKAL 689

Query: 432  CKAAVFGRRNVDEPLPSTIRMDRCDIYGSKTVGRILQEIMKPGHSKHWRVILKAATGIDD 253
            C                TI  + C +  S+     L+E MK G S  W   L+  +G  +
Sbjct: 690  CPEG-------------TILSEGCIL--SEDTTEKLRETMKLGSSITWLKALEMISGKGE 734

Query: 252  ISGAALKRYYRPLYKILNKMVARYRIPIGW 163
            +    L  YY PL   L       ++ +GW
Sbjct: 735  LDAQPLLEYYEPLINWLRNTNEIDQVVVGW 764


>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform g protein.
          Length = 1604

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1404 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1442


>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform f protein.
          Length = 1818

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1618 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1656


>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform e protein.
          Length = 1954

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1754 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1792


>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform d protein.
          Length = 1995

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1795 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1833


>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform h protein.
          Length = 2006

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1806 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1844


>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform a protein.
          Length = 2007

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 378  WC*AGARRHYADRRLPLCTASHKLGAGGSCSRSIVHKEC 494
            WC A + R+Y ++R   C   H  G G S +  +  +EC
Sbjct: 1807 WCEAMSNRYYFNKRARQCKGFHYTGCGKSGNNFLTKEEC 1845


>AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical
           protein Y71A12B.15 protein.
          Length = 758

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 599 MEIFGTWPWNYKESFHQFIGAKTILTPELNFM-CQTTLLMHDTS*AASSSTKFMRR 435
           +++   WP NY+++   F+  + +L PEL F+ C +  L  D     + S   +R+
Sbjct: 239 LDVSRDWPDNYRQTIRYFLACEKVL-PELKFLDCSSAYLDEDLYKELAQSHPHLRK 293


>U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical
           protein B0507.6 protein.
          Length = 857

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 525 QNSLRP--YKLVERFLVIPRPCPKNLHSNCSDHSQNTFQRYSSKTNANAI 668
           QN+LR   Y+  E+ +++PR    + H  C+D      + Y   T++N +
Sbjct: 260 QNTLRSDSYQDTEKKIILPRNTSNSHHEICNDVQSYPGKHYDKNTSSNFV 309


>U00032-12|AAA50629.1|  482|Caenorhabditis elegans Hypothetical
           protein F37A4.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -2

Query: 354 YGSKTVGRILQEIMKPGHSKHWRVILKAATGIDDISGAALKRYYRPLYKILNKMVAR 184
           YG++T GR+  E     +S+   +        DD S AALK+Y   L  ++   VAR
Sbjct: 84  YGARTFGRLFDET----NSRFLDIWENEKNKKDDNSHAALKKYDFELLDVIPDFVAR 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,720,151
Number of Sequences: 27780
Number of extensions: 417423
Number of successful extensions: 1158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)