Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1625
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889 48 6e-06
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 45 3e-05
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 45 4e-05
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 40 8e-04
02_05_1332 + 35758657-35758728,35758959-35760689 36 0.024
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 34 0.073
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 33 0.096
07_01_0287 - 2094333-2094542,2094719-2095999 33 0.17
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 32 0.29
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 30 0.90
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 30 0.90
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 30 1.2
08_01_0465 + 4099721-4100556,4101505-4103614 29 1.6
05_05_0044 - 21819193-21819418,21819531-21820759 29 1.6
05_05_0351 - 24319356-24319385,24319470-24320902,24321011-243211... 29 2.1
11_01_0284 + 2107562-2107811,2107928-2108208,2108589-2109413 28 3.6
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 28 4.8
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 4.8
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 27 6.3
04_04_1478 - 33882625-33883639,33883725-33883849,33883935-338841... 27 6.3
01_06_0463 + 29567339-29567644,29568416-29568835 27 6.3
01_05_0602 + 23577328-23579805 27 6.3
09_04_0016 + 13800489-13800629,13801050-13801231,13801493-138015... 27 8.4
>05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889
Length = 493
Score = 47.6 bits (108), Expect = 6e-06
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Frame = +1
Query: 157 DCYFYYYS--TCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRK-- 324
DC ++ S TCTKG C +RH A C W +G C + C RH L K
Sbjct: 19 DCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLENLNKTK 78
Query: 325 ---------------QIPCYWENQPGGCRKIHCPFMHKNPEARTDGIAPSQPAPPVHACL 459
PCY+ + +CP++H+ P D + S A + +
Sbjct: 79 SLADPLSLCSTSVKAANPCYFYYNSHCSKGDNCPYLHE-PLTSNDAVGTSCKATTSNPAV 137
Query: 460 NESVV 474
++S V
Sbjct: 138 SKSYV 142
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 139 SPRKFNDCYFYYYSTCTKGDNCVFRHEP 222
S + N CYFYY S C+KGDNC + HEP
Sbjct: 90 SVKAANPCYFYYNSHCSKGDNCPYLHEP 117
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 142 PRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKC-TDKRCKLRHMELRKN 318
P+ C+FY + C +G+ C F H+ + L CT + +G C C H EL K
Sbjct: 429 PKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDH-ELSK- 486
Query: 319 RKQIPCYWENQPGGC-RKIHCPFMHKNPEA 405
PC+ + G C R C F H P A
Sbjct: 487 ---YPCHNFMENGMCIRGDKCKFSHVIPTA 513
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 136 ESPRKFNDCYFYYYS--TCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRH 300
E+ R+ DC ++ S TC KG+ C FRH +A C W C + +C RH
Sbjct: 29 EALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRH 85
Score = 35.5 bits (78), Expect = 0.024
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 139 SPRKFNDCYFYYYSTCTKGDNCVFRHEPSALG 234
S ++ CY++ C KGD C F H P ++G
Sbjct: 111 SGKQLVPCYYFKKGNCLKGDRCAFYHGPQSVG 142
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 40.3 bits (90), Expect = 8e-04
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Frame = +1
Query: 85 LISVLKFARVRVAKNTMES--PRKFNDCYFYY-YSTCTKG-DNCVFRHEPSALGCETMCT 252
+I +L +VR + +T+ S +K C F+ + C K C + H+ + + T+CT
Sbjct: 1808 VIRMLASDKVRWSLHTVRSRLAKKQQYCQFFTRFGECKKPRGKCPYIHDRAKV---TICT 1864
Query: 253 AWQQGKCTDKRCKLRHMELRKNRKQIPCYWENQPGGCRKIHCPFMH 390
+ +G C++ CKL H L + + G C I CP+ H
Sbjct: 1865 KFLKGLCSNTSCKLTHKVLPERMPDCSYFLR---GLCTNIACPYRH 1907
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 35.5 bits (78), Expect = 0.024
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 160 CYFYYYSTCTKGDNCVFRHEPSALG 234
CY++ C KGD C F H P A G
Sbjct: 68 CYYFQKGMCVKGDRCAFLHLPQATG 92
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 33.9 bits (74), Expect = 0.073
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = +1
Query: 160 CYFYYYSTCTKGDNCVFRHEPSAL--GCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIP 333
C+ + C++G NC + H+ S G G+ E R+ K P
Sbjct: 320 CHDFVKGRCSRGANCRYVHDDSTPHGGWRDEVRDNAIGRSGPDSSYGNRTEHRRTNKN-P 378
Query: 334 C-YWENQPGGCRK-IHCPFMHKNPEARTDGI-APSQP 435
C ++ N GGCR+ +CP++H+ G+ AP +P
Sbjct: 379 CKFFAN--GGCRRGQNCPYLHEEASQSQMGLGAPDEP 413
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 154 NDCYFYYYSTCTKGDNCVFRHEPSA 228
N C F+ C +G NC + HE ++
Sbjct: 377 NPCKFFANGGCRRGQNCPYLHEEAS 401
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 33.5 bits (73), Expect = 0.096
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 133 MESPRKFNDCYFYYYSTCTKGDN-CVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHM 303
+E P+ C + C++ N C F H C +C + +G+C K C+ H+
Sbjct: 177 VEDPKVKMVCRDFTRGRCSRSANECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRYSHV 234
>07_01_0287 - 2094333-2094542,2094719-2095999
Length = 496
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 106 ARVRVAKNTMESPRKFNDCYFYYYSTCTKGDNCVFRH 216
A R A +E +K YF+ TC +GD C FRH
Sbjct: 458 ANCRFAHGEVELGKKEPCWYFFSGQTCPRGDTCGFRH 494
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 31.9 bits (69), Expect = 0.29
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Frame = +1
Query: 154 NDCYFYY-YSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQI 330
+DC Y + C G NC F H P L + + W+ C K ++ N +
Sbjct: 105 HDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGL 164
Query: 331 P-------CYWENQPGGCR-KIHCPFMHKN 396
P C + G C+ +C F H N
Sbjct: 165 PLRPGTGLCSYYMNRGICKFGSNCKFHHPN 194
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 30.3 bits (65), Expect = 0.90
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 160 CYFYYYSTCTKGDNCVFRHEPSALG 234
C FY CT+G C +RHE G
Sbjct: 163 CSFYVRGECTRGAECPYRHEMPETG 187
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 30.3 bits (65), Expect = 0.90
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 160 CYFYYYSTCTKGDNCVFRHEPSALG 234
C FY CT+G C +RHE G
Sbjct: 163 CSFYVRGECTRGAECPYRHEMPETG 187
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 29.9 bits (64), Expect = 1.2
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Frame = +1
Query: 133 MESPRKFNDCYFYYYSTCTKGDNCVF--RHEPSALG-CETMCTAWQQGKCTDKRCKLR-H 300
+ES D Y+++ +G + + + +P LG E T G D +LR H
Sbjct: 572 VESEHALRDTYYFFEEFQAEGLHGIAGEKWDPVMLGGAENGDTISVYGNGADMETELRCH 631
Query: 301 MELRKNRKQIPCYWENQPGGCRKIHCPFMHKNPEARTDGIAPSQPAPPVHACL 459
L + C ++ G R I C R GIA S+P PP+ C+
Sbjct: 632 GGLDLWEVRCVCGAQDDDGE-RMIACDACDVWHHTRCVGIADSEPVPPLFLCV 683
>08_01_0465 + 4099721-4100556,4101505-4103614
Length = 981
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 128 IPWSLHVNSTIVTFITIPHVQREIIVCFAMSRQP*AVKQCAQP 256
I W ++V T FI+ H++R +VC SR P + A P
Sbjct: 772 ILWGMNVTWTRTGFISPWHLRRLCLVCIEFSRLPAWINSSALP 814
>05_05_0044 - 21819193-21819418,21819531-21820759
Length = 484
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 403 ARTDGIAPSQPAPPVHACLNESVVEQS 483
AR G+AP QPAPP +V EQ+
Sbjct: 301 ARLSGVAPQQPAPPAGTGAGMAVDEQA 327
>05_05_0351 -
24319356-24319385,24319470-24320902,24321011-24321180,
24321302-24321485,24323094-24323264,24324002-24324125
Length = 703
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 133 MESPRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCE 240
M++ + C FY C G +C F HE G +
Sbjct: 173 MKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSD 208
>11_01_0284 + 2107562-2107811,2107928-2108208,2108589-2109413
Length = 451
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 209 FAMSRQP*AVKQCAQPGNRGNVLINAVNYVTWSLGKIVNKFHATGRTNLVAV 364
F M R+P K+ +P + V+++ V +WS V + H+T TN A+
Sbjct: 96 FFMVREPSKTKKKDEPNRK--VVVDGVEEGSWSATGSVVQIHSTKETNRKAI 145
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 160 CYFYYYSTCTKGDNCVFRHEPSA 228
C F+ +C +GD C F H A
Sbjct: 986 CVFFLNGSCNRGDTCHFSHSSRA 1008
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 420 CSKSACPTCSCLPKR--ECGGAVHRWE 494
C + CP C L KR CG VH +E
Sbjct: 597 CHLNDCPPCKALVKRPCHCGAMVHAFE 623
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 DCYFYY-YSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQI 330
DC +Y + +C G NC F H P M QQ + C H+E + +Q+
Sbjct: 95 DCSYYVKFGSCKFGMNCRFNHPP------RMPVPPQQEYFSGNACHCHHIEGKSKVEQV 147
>04_04_1478 -
33882625-33883639,33883725-33883849,33883935-33884144,
33884645-33884650
Length = 451
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 313 KNRKQIPCYWENQPGGCRK-IHCPFMH 390
K R PC + N P GCR C F+H
Sbjct: 396 KVRPMKPCAYFNSPKGCRNGASCTFLH 422
>01_06_0463 + 29567339-29567644,29568416-29568835
Length = 241
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 408 TCLGVLMHEWAVNLATATRLVLPVAWNLFTIF 313
TC+G+LM W + A L + W +F ++
Sbjct: 203 TCVGILMAGWPFLIGMAAFSSLLIGWFVFAVY 234
>01_05_0602 + 23577328-23579805
Length = 825
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 118 VAKNTMESPRKFNDCYFYYYSTCTKGDNC--VFRH--EPSALGCETMCTAWQQ 264
V K +E+ R N+C YS C ++ VF EP + C M + + +
Sbjct: 288 VIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDR 340
>09_04_0016 +
13800489-13800629,13801050-13801231,13801493-13801596,
13801914-13801927
Length = 146
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 42 QKLLFSINYFHELKVN*CFKICSSPGSEKY 131
QKL F N LK++ +ICS P ++KY
Sbjct: 107 QKLCFGFNVLRILKISISIEICSGP-TKKY 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,619
Number of Sequences: 37544
Number of extensions: 326918
Number of successful extensions: 885
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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