Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1624
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.96 
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    26   0.96 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 513 YMIKEYGKRKLAASTPSGWEQRKLP 439
           Y  ++  +++ AA+ PS W+Q+KLP
Sbjct: 382 YTQQQQQQQQSAAAPPSYWKQKKLP 406


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 44  DGEWLPSPIDVSNFRGRAKP 103
           DGEW P  ID   ++G  KP
Sbjct: 255 DGEWEPPMIDNPEYKGEWKP 274


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 427  YERLWKLSLFPATWGRRSKFSLSILL 504
            +  +WK SL   + G+RS  +LS++L
Sbjct: 1072 FNGMWKESLTELSGGQRSLVALSLIL 1097


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 191 VLFLIIVNDTYPLLYYILEE 132
           +L + + ND   +++YILEE
Sbjct: 888 ILHIAVDNDALDIVHYILEE 907


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,324
Number of Sequences: 2352
Number of extensions: 13796
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)