Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1621
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127190-1|AAI27191.1|  284|Homo sapiens RAD52 motif 1 protein.        29   9.5  
AB079368-1|BAC81343.1|  882|Homo sapiens PIWIL3 protein.               29   9.5  

>BC127190-1|AAI27191.1|  284|Homo sapiens RAD52 motif 1 protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 146 IQHLITIINSSS*--LKNFYFYCVGWGKRISRNKHVTNL 256
           +QH    +NSS    L N+YF   GW KRI + + +++L
Sbjct: 102 VQHQALALNSSKCQELANYYFGFNGWSKRIIKLQELSDL 140


>AB079368-1|BAC81343.1|  882|Homo sapiens PIWIL3 protein.
          Length = 882

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 467 LRLAVSCVLLFHISCVLLYHVLCRVPRERYKKYPMSFSWFYATSSPIFSQ 318
           LR      L   +SC+L++ V+C +P +  ++Y  S   +  T  PI SQ
Sbjct: 559 LRKYTRPTLQMGMSCLLVFKVICILPNDDKRRYD-SIKRYLCTKCPIPSQ 607


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,794,518
Number of Sequences: 237096
Number of extensions: 1461695
Number of successful extensions: 6325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6324
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)