Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1619
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 27 8.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 8.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 8.9
U21324-17|AAK93840.2| 222|Caenorhabditis elegans Hypothetical p... 27 8.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 8.9
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 214 ICQLDEYCSPETNRC 258
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 214 ICQLDEYCSPETNRC 258
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 508 KQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPRTQARNTKPR 633
K+K+ K ++K +D+ AP P+PR A+N P+
Sbjct: 50 KEKYHAGKEKLKTKISDVKS-KLRGPAPTPQPRPPAQNNLPK 90
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>U21324-17|AAK93840.2| 222|Caenorhabditis elegans Hypothetical
protein C35D10.1 protein.
Length = 222
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 566 ITTLMPKRRNRNPELKLEIRNPGSPKTNEP 655
+ ++PK +PELK E+ N PK + P
Sbjct: 161 VMLILPKMTANDPELKKEMENMQMPKVDMP 190
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,601,305
Number of Sequences: 27780
Number of extensions: 329097
Number of successful extensions: 1022
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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