Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1608
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = -3

Query: 383 VYSLEVETLRRTRKLYQRILKKKLDFTLCIENYHRIKN 270
           ++SL+++T       +++I++K   F   ++N H I+N
Sbjct: 315 IFSLDLDT-------FKKIMQKAWSFFTALKNMHDIRN 345


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 487 YRKPDINDLSFA*KYCVDIFAAV 419
           Y K DI  LSF  K C +IF  V
Sbjct: 6   YSKKDIRSLSFFYKIC-NIFGIV 27


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 487 YRKPDINDLSFA*KYCVDIFAAV 419
           Y K DI  LSF  K C +IF  V
Sbjct: 6   YSKKDIRSLSFFYKIC-NIFGIV 27


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 167 ALVPQWIIQYYYSWISDEIL 226
           +LV  WI Q Y   + D+IL
Sbjct: 201 SLVQLWIFQLYLLILCDQIL 220


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 132 SRVEVLFSISRASCYNQKR 76
           SRV+V F   RA C  Q++
Sbjct: 111 SRVQVWFKNRRAKCRQQQK 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,811
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)