Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1608
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   1.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.4  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    25   3.2  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   7.3  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    23   9.7  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    23   9.7  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 519 PEIYRMVIPTSMGPQNALPPVKAG*RCPFLTFHLRQLQPK 638
           P +  M  P  M P   +PP+  G R P ++    QL PK
Sbjct: 111 PPMMGMRPPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNPK 150



 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +3

Query: 543 PTSMGPQNALPPVKAG*RCPFLTFHLRQLQPKXRG---PILERDPTQPIP 683
           P  MGP   LPP   G R P +      + P   G   P++   P Q  P
Sbjct: 100 PLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 465 SLISGFRYSDIYYVPLF*PEIYRMVIPTSMGPQN 566
           +L  GF+ +D+Y V L   E+ R  I T  G +N
Sbjct: 445 NLFEGFKMADMYSVGLVFWEMARRCITTVRGAKN 478


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 60  GICFKRCQRPMTSVCLMRVF 1
           G+C +R Q+P T+ C  R F
Sbjct: 208 GMCLQRNQQPPTADCCTRAF 227


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/48 (20%), Positives = 21/48 (43%)
 Frame = -1

Query: 712 LNHDRFFNNQGIGCVGSRSRIGPRIFGCSCRKWNVRNGHR*PAFTGGR 569
           +N  + F+++G+ C      +   +F    ++W        P FT G+
Sbjct: 90  VNDFQHFHDRGVYCNEHSDPMSANLFALPGQRWKNLRAKLTPTFTSGQ 137


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/48 (20%), Positives = 20/48 (41%)
 Frame = -1

Query: 712 LNHDRFFNNQGIGCVGSRSRIGPRIFGCSCRKWNVRNGHR*PAFTGGR 569
           +N  + F+++G+ C          +F    ++W        P FT G+
Sbjct: 90  VNDFQNFHDRGVYCNEEHDPFSANLFALPGQRWKNLRAKLTPTFTSGQ 137


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/48 (20%), Positives = 20/48 (41%)
 Frame = -1

Query: 712 LNHDRFFNNQGIGCVGSRSRIGPRIFGCSCRKWNVRNGHR*PAFTGGR 569
           +N  + F+++G+ C          +F    ++W        P FT G+
Sbjct: 90  VNDFQNFHDRGVYCNEEHDPFSANLFALPGQRWKNLRAKLTPTFTSGQ 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,635
Number of Sequences: 2352
Number of extensions: 14808
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)