Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1608
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    26   0.42 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.2  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   9.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 10/42 (23%), Positives = 16/42 (38%)
 Frame = -1

Query: 694 FNNQGIGCVGSRSRIGPRIFGCSCRKWNVRNGHR*PAFTGGR 569
           F N+G+G       + P +      +W        P FT G+
Sbjct: 102 FANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGK 143


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 536 HPVYLWLEKWDIVYIAI 486
           HP Y W EK ++ + A+
Sbjct: 259 HPTYDWFEKLELKWFAV 275


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 524 DIQDGDTYQYGPPKRPTTSKGRLAMPIPYVP 616
           D  DG T +  PP+  TT K   A+ +   P
Sbjct: 219 DEDDGATPRKAPPQLSTTDKKGSAIDLDIGP 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,166
Number of Sequences: 438
Number of extensions: 4585
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)