Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1601
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0027 + 9078792-9079613 36 0.026
09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 31 0.56
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 31 0.98
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 31 0.98
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 31 0.98
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 30 1.7
06_01_0041 + 403634-403817,404154-404332,404431-404536,404620-40... 29 2.3
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421... 29 3.0
05_01_0089 + 589457-589506,589598-589741,589820-589903,590118-59... 29 4.0
03_05_0173 + 21502765-21504216 29 4.0
12_02_0850 + 23651496-23651801,23651893-23651986,23652280-236523... 28 5.2
09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465 28 5.2
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 28 5.2
02_02_0187 + 7611922-7614099,7614692-7614795,7614828-7614996 28 5.2
10_06_0014 - 9605186-9607609 28 6.9
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 6.9
05_04_0441 - 21271106-21271495,21271608-21271751,21272639-212727... 28 6.9
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 28 6.9
10_05_0029 - 8319233-8319408,8319516-8319584,8319754-8319838,832... 27 9.2
06_03_0272 + 19053455-19053587,19054665-19056627,19056827-190568... 27 9.2
>11_03_0027 + 9078792-9079613
Length = 273
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 153 NPSTTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPV 281
+PS + ++NSN+SI+ K+ +NT S + T NSPV
Sbjct: 27 SPSIILKLTTNSNSSISFKLFSNTTSSSSSSVTTTASTPNSPV 69
>09_06_0302 -
22144271-22144543,22144946-22145083,22146004-22146278,
22146486-22146957
Length = 385
Score = 31.5 bits (68), Expect = 0.56
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 204 LKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFEN------GKVTETSNGSNIYIINDDRH 365
+K+ + +G T K+ V + PV VIT + G V GSN N D H
Sbjct: 255 VKIDGECLVPSGNETALKLAVLSQPVSVVITISDEFRSYRGGVFRGPCGSNP---NVDNH 311
Query: 366 VVSVSQNGVTTQNAK 410
VV V GVTT N K
Sbjct: 312 VVLVVGYGVTTDNIK 326
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 30.7 bits (66), Expect = 0.98
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Frame = +3
Query: 135 IGSKIENPSTTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKV 314
+ ++ NP+ + + I + M+ +G TNTKV+ P R E V
Sbjct: 220 VRNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKVF----PTRQYAFVEFATV 275
Query: 315 TETSNG-SNI--YIINDDRHVVSVSQNGVTTQNAKNPKETS 428
E SN N+ + ND R + S + + NP S
Sbjct: 276 GEASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVS 316
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 288 VITFENGKVTETSNGSNIYIINDDRHVVS 374
VI+FE GK+ +NGS + I DD HV+S
Sbjct: 71 VISFETGKMARFANGS-VVISMDDTHVLS 98
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 30.7 bits (66), Expect = 0.98
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 3/161 (1%)
Frame = +3
Query: 138 GSKIENPSTTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKVT 317
G+ N T+ + ++ + GG +N+ ++ S +G V
Sbjct: 237 GAGYFNGEPTVTSQMQQQKQFPSNQNSHQIQHIGGHSNSGMHSNMLENSSAYGLSDGHVN 296
Query: 318 ETS--NGSNIYIINDDRHVVSVSQNGVTTQ-NAKNPKETSFDVCVENKKQMFQEQEPIKV 488
+GSN+ + N R S + ++T N+ P + F+ ++ Q I
Sbjct: 297 GGMGVHGSNMQLTN--RSAASEAYINISTYGNSPKPVQQQFN---QHPPQRIPTPVDISG 351
Query: 489 QENKFNKNSINDTGMNNNRKLSLQIGGATNNNSFVYKNQLN 611
N +N S T NN+ + + + NS ++ NQLN
Sbjct: 352 SGNFYNTGSSALTAANNHSMGATNLPSRSRMNSMLHTNQLN 392
>07_03_1632 + 28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Frame = +3
Query: 153 NPSTTMLASSNSNNSITL-KVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKVTETSN 329
N ST N + ++ K ++ S N+K + SP++ E+ SN
Sbjct: 1184 NGSTHYPPDGNPQSEVSFGKEKSHPKSNKHDMQNSKAQMLPSPLKES-KVESHSAPLRSN 1242
Query: 330 GSNIYIINDDRHVVSVSQNGVTTQNAKNPKETSFDVCVENKKQMF--QEQEPIKVQENKF 503
S + +V + Q+G+T Q NP +TS V +N + +E +K + N+
Sbjct: 1243 ASKLTAQLKRGNVENGGQHGITKQAISNPADTSSPVRKDNNSTGYALKEARDLKHKANRL 1302
Query: 504 NK 509
+
Sbjct: 1303 KE 1304
>06_01_0041 +
403634-403817,404154-404332,404431-404536,404620-404936,
405231-405605,406199-406283,406570-408066,408575-408738
Length = 968
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 147 IENPSTTM-LASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKVTET 323
IEN + + S ++SI++ + + GGT+ YV+N +++ + E+
Sbjct: 346 IENEGKSKNIGSVRKDHSISILEQFFGSALSKGGTDLPPYVENQQMKNDDDVIVSSLPES 405
Query: 324 SNGSNIYIINDDRHVVSVSQNGVTTQNAKNPK 419
S ++ + D + +S NG+ + KN K
Sbjct: 406 SKFAHWFHDEDSKPAEDLSSNGLLSMIVKNEK 437
>06_01_0587 -
4211917-4212021,4212250-4212478,4213426-4213759,
4215116-4215186,4215374-4215493,4216353-4216771,
4216885-4217336,4217434-4217812
Length = 702
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 246 TNTKVYVQNSPVRSVITFENGKVTETSNGSNIYIINDD 359
T TK V +SP RS + ++ V E NG + +DD
Sbjct: 280 TTTKSNVSDSPPRSCVVDDDDDVAEGGNGGEVVEEDDD 317
>05_01_0089 +
589457-589506,589598-589741,589820-589903,590118-590261,
590351-590401,590492-590641,591175-591488,592685-592815,
593131-593451,594994-595057,595322-595443
Length = 524
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 531 MNNNRKLSLQIGGATNNNSFVYKNQLNNT 617
+N RKL L+ G+T NNS N N+T
Sbjct: 111 LNRKRKLDLRRSGSTLNNSSTCSNPANHT 139
>03_05_0173 + 21502765-21504216
Length = 483
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 159 STTMLASSNSNNSITLKVTTNTMSQNGGGTNT 254
ST ++AS+ S +S TT +QN GG T
Sbjct: 311 STPLVASNQSESSAMTTTTTTNSNQNSGGGRT 342
>12_02_0850 +
23651496-23651801,23651893-23651986,23652280-23652398,
23652456-23652578,23652919-23652978,23653473-23653523
Length = 250
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 620 VSIVQLILINETIVICRTAYLQRKLTIIIHTRVVYGVFIKFIFLYFNRFLFLKHLLF--V 447
V ++ L+ + I +CR + RKL + H +VY V F F KH++ V
Sbjct: 68 VGLLMLLYLPIWIYVCRKDFRSRKLCLTPHA-IVYKVTRPATFPCFGVLRNEKHVVLHSV 126
Query: 446 FDTDVE*GFFW-IFGV 402
D VE G+ +FG+
Sbjct: 127 SDIVVEQGYLQSLFGI 142
>09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465
Length = 1058
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 534 SYPCRLWSFY*IYFLVL*SVPVLETFAFCFRHRRRMRFL 418
S P + S + FL+L + P+LE+ C H +++R L
Sbjct: 576 SIPASIGSLTMLQFLILKNCPLLESLPRCVGHLKKLRSL 614
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = +3
Query: 138 GSKIENPSTTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKVT 317
G+ + PS +AS+N S + S + K N P+++ + E + T
Sbjct: 557 GASVVTPSQVSVASTNPLQSSVVVKKPWQRSVSREKEPEKDISSNKPLQNRVLAEEAEKT 616
Query: 318 ETSNGSNIYIINDDRHVVSVSQNGVTTQNAKNPKETS 428
+ + II D ++ NG TT+N+ E++
Sbjct: 617 NVTADNKSQIIQDKKN------NGATTENSSQISESA 647
>02_02_0187 + 7611922-7614099,7614692-7614795,7614828-7614996
Length = 816
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 360 RHVVSVSQNGVTTQNAKNPKETSFDVCVENKKQMFQEQEPIKVQE 494
R +V V QNG TT+ +N T F + V + + EP V+E
Sbjct: 486 RLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEE 530
>10_06_0014 - 9605186-9607609
Length = 807
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 156 PSTTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFENGKVTETSNGS 335
P T L S+N N + + + ++ +G G + + + +S+I + +V T+NG+
Sbjct: 73 PMITPLWSANGENPV-VDPASPELTISGDGN---MVIMDQATKSIIW--STRVNTTTNGT 126
Query: 336 NIYIINDDRHVVSVSQNG--VTTQNAKNPKETSF 431
+ ++ND V+ S N V Q+ P ++ F
Sbjct: 127 VVVLLNDGNLVLQSSSNSSMVFWQSFDYPTDSLF 160
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 354 DDRHVVSVSQNGVTTQNAKNPKETSFDVCVENKKQMFQEQEPIKVQENKFNKNSIN 521
DD H V+ S + + K+ +F N +Q +E+ ++ EN+ + S+N
Sbjct: 788 DDIHYVADSDRLIPAGETEFAKDAAFGYKSSNLRQWVEEKTKGRISENQVSTISVN 843
>05_04_0441 -
21271106-21271495,21271608-21271751,21272639-21272746,
21272846-21272859,21273103-21273154,21273592-21273656,
21274447-21274579,21275260-21275341,21275639-21275715,
21276037-21276093
Length = 373
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 162 TTMLASSNSNNSITLKVTTNTMSQNGGGTNTKVYVQNSPVRSVITFEN 305
T M+ S IT N +S++G NTK++ N +++I FE+
Sbjct: 295 TKMIHISALPQEITEDAILNHVSEHGSVVNTKLFEVNGKRQALIQFES 342
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 321 TSNGSNIYIINDDRHVVSVSQNGVTTQNAK-NPKETSFDVCVE-NKKQMFQEQEPIKVQE 494
T NG NI++++ + ++N V + +AK +P E + + +++ + ++++ K++
Sbjct: 546 TRNGQNIHVLSAEDQCQMETENSVLSHSAKVSPAEHDIQIMSDLHEQSLPKKKKKQKLEV 605
Query: 495 NKFNKNSINDTGMN 536
+ + I+D M+
Sbjct: 606 TREKQTMIDDIPMD 619
>10_05_0029 -
8319233-8319408,8319516-8319584,8319754-8319838,
8320112-8320225
Length = 147
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 453 FCFRHRRRMRFLLDFWRFGL 394
FC +RRR+RFL R+GL
Sbjct: 26 FCHPNRRRLRFLQGILRYGL 45
>06_03_0272 +
19053455-19053587,19054665-19056627,19056827-19056887,
19056975-19057198,19057573-19057642,19058453-19058515
Length = 837
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +3
Query: 264 VQNSPVRSVITFENGKVTETSNGSNIYIINDDRHVVSVSQNGVTTQNAKNPKETSFDVCV 443
+ +SP RS I +GKV++ +G +Y + + + ++ K T+ ++C
Sbjct: 760 LSDSPGRSYIVENSGKVSDEVSGEELYGLGKLAPTYTHLPSIISKPFTKEYSLTTVELCG 819
Query: 444 ENKKQMF 464
EN+ +++
Sbjct: 820 ENEARIW 826
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,025,770
Number of Sequences: 37544
Number of extensions: 310790
Number of successful extensions: 760
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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