Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1599
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin ... 89 1e-18
U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical pr... 72 2e-13
AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical ... 54 7e-08
AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical ... 50 8e-07
Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 31 0.32
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 31 0.32
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 30 0.73
Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical pr... 30 0.96
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 29 1.7
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 29 1.7
U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical pr... 28 2.9
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 28 3.9
AF036694-3|AAB88343.3| 344|Caenorhabditis elegans Hypothetical ... 27 5.1
Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical p... 27 9.0
>AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin
protein 10 protein.
Length = 105
Score = 89.0 bits (211), Expect = 1e-18
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +3
Query: 84 KVVVFSKSYCPYCKLAKDVFEKVK---QPIKVIELNERDDGNTIQDNLAQLTGFRTVPQV 254
KVVVFSKSYCPYC A+ E V ++ IE++ER D N IQD L LTG R+VP+V
Sbjct: 14 KVVVFSKSYCPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSLTGARSVPRV 73
Query: 255 FINGNCVGGGSDVKALYESGKLEPML 332
FING GGG D A ++GKL +L
Sbjct: 74 FINGKFFGGGDDTAAGAKNGKLAALL 99
>U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical
protein F10D7.3 protein.
Length = 146
Score = 72.1 bits (169), Expect = 2e-13
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 81 YKVVVFSKSYCPYCKLAKDVFEKVK-QPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVF 257
+KV+V+SK+YCP+ K K + + +K++EL+ + +Q+ L + +G TVPQ+F
Sbjct: 44 HKVMVYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVPQLF 103
Query: 258 INGNCVGGGSDVKALYESGKLEPML 332
I+G VGG + KA+ E G+L P+L
Sbjct: 104 ISGKFVGGHDETKAIEEKGELRPLL 128
>AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical
protein ZK121.1a protein.
Length = 119
Score = 53.6 bits (123), Expect = 7e-08
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 KYKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRT 242
K VV+++K+ C +C AKD+F V+ K + L+ + DD I + L T +
Sbjct: 19 KDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTS 78
Query: 243 VPQVFINGNCVGGGSDVKALYESGKL 320
VPQ+F+ G +GG +++ AL SG L
Sbjct: 79 VPQIFVCGRFIGGYTELDALRNSGHL 104
>AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical
protein ZK121.1b protein.
Length = 96
Score = 50.0 bits (114), Expect = 8e-07
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +3
Query: 93 VFSKSYCPYCKLAKDVFEKVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRTVPQVF 257
+++K+ C +C AKD+F V+ K + L+ + DD I + L T +VPQ+F
Sbjct: 1 MYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIF 60
Query: 258 INGNCVGGGSDVKALYESGKL 320
+ G +GG +++ AL SG L
Sbjct: 61 VCGRFIGGYTELDALRNSGHL 81
>Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical
protein ZC334.7 protein.
Length = 210
Score = 44.4 bits (100), Expect = 4e-05
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 78 KYKVVVFSKSYCPYCKLAKDVFEKVKQ--PIKVIEL-NERDDGNTIQDNLAQLTGFRTVP 248
+Y V++++ C C+ AK + P +EL + D +Q +L ++T T P
Sbjct: 115 RYPVMMYTLIQCVPCQRAKHLLATTYGDIPSHFLELVGDEDWQRQLQVDLLKVTRQATFP 174
Query: 249 QVFINGNCVGGGSDVKALYESGKLEPML 332
VF+ GN +GG SD+ ++ SG+L L
Sbjct: 175 YVFVCGNFIGGSSDLFNMHHSGQLRQAL 202
>U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical
protein C07G1.8 protein.
Length = 131
Score = 41.5 bits (93), Expect = 3e-04
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = +3
Query: 45 TFNSLSRKLSPKYK---VVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD- 212
T + S+K+ + K VV+++K C YC AK+ E + I E N I +
Sbjct: 12 TLSEHSKKIVEEVKEHAVVLYTKDGCGYCVKAKN--ELYEDGIHYTEKNLNTVSKVIPNP 69
Query: 213 -----NLAQLTGFRTVPQVFINGNCVGGGSDVKAL 302
L LT RTVPQ+FI G VGG +++ AL
Sbjct: 70 QEYIQGLMDLTRQRTVPQIFICGKFVGGYTELNAL 104
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 153 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 302
++P+++ E+ + Q + LT + P ++I GN VGG ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 153 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 302
++P+++ E+ + Q + LT + P ++I GN VGG ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +3
Query: 63 RKLSPKYKVVVFSKS-----YCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQL 227
+KL ++++F K C + + D+ K + ++ E ++ ++ L +
Sbjct: 248 KKLVSSQRLMLFMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEE---VRQGLKKF 304
Query: 228 TGFRTVPQVFINGNCVGGGSDVK 296
+ + T PQ++++G VGG VK
Sbjct: 305 SNWPTYPQLYLDGELVGGLDVVK 327
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 84 KVVVFSKS--YCPYCKLAKDVFEKVKQ-PIKVIELNERDDGNTIQDNLAQLTGFRTVPQV 254
KV+VF K P C ++ + E + IK + D ++ L + + + T PQ+
Sbjct: 147 KVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPTYPQL 205
Query: 255 FINGNCVGGGSDVK 296
+ +G +GG VK
Sbjct: 206 YFDGELIGGLDVVK 219
>Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical
protein Y49E10.2 protein.
Length = 142
Score = 29.9 bits (64), Expect = 0.96
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 78 KYKVVVFSKSYC--PYCKLAKDVFEKVK-QPIKVIELNERDDGNTIQDNLAQLTGFRTVP 248
K VVVF K P C +++V + +K + N D +++ + + + T+P
Sbjct: 44 KDDVVVFMKGTQQEPACGFSRNVKLVLDFHNVKFQDYNVLTD-QELREGVKIFSEWPTIP 102
Query: 249 QVFINGNCVGGGSDVKALYESGKLEPML 332
QV++ G VGG + ++++ G++ L
Sbjct: 103 QVYVKGEFVGGCDILISMHKDGEISDFL 130
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 51 NSLSRKLSPKYKVVVFSKSYCPYCKLAKDVFE 146
NSL S + K+ +++YC YC+ AK V E
Sbjct: 313 NSLKCSGSGRCKINTVTRNYCSYCRYAKCVSE 344
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 84 KVVVFSKS--YCPYCKLAKDVFEKVKQ-PIKVIELNERDDGNTIQDNLAQLTGFRTVPQV 254
KV+VF K P C ++ + E + IK + D ++ L + + + T PQ+
Sbjct: 147 KVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPTYPQL 205
Query: 255 FINGNCVGGGSDVK 296
+ +G +GG VK
Sbjct: 206 YFDGELIGGLDVVK 219
>U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical
protein F58F9.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 93 VFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGN 269
V + + CP C+ DV +KVK+ +K L+ DGN+ L F VP + N
Sbjct: 162 VETSNKCP-CRAMIDVSDKVKRNLKTFPLSVDYDGNSCTAR-QNLEYFNNVPTQIVPCN 218
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 283 PPPTQLPFIKT*GTVLKP 230
PPPT+LP I T GT P
Sbjct: 425 PPPTRLPLITTIGTTTNP 442
>AF036694-3|AAB88343.3| 344|Caenorhabditis elegans Hypothetical
protein CD4.5 protein.
Length = 344
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 48 FNSLSRKLSPKYKVVVFSKSYCPY--CKLAKDVFEKVKQPI 164
F+ R +SPK KV + + CPY +L KD F + +Q +
Sbjct: 259 FDVYIRSVSPKLKVCIDNFENCPYNSPQLRKDAFWRGEQKL 299
>Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical
protein K03H1.11 protein.
Length = 296
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 159 PIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 302
P+K + L+E D LA L G+ + +V I G +GG ++ K L
Sbjct: 122 PLKQLALSEIDLERINTWTLALLAGYDKLEKVEIEGCNLGGDTEAKLL 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,939,772
Number of Sequences: 27780
Number of extensions: 187039
Number of successful extensions: 556
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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