Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1598
(485 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070100-1|AAH70100.1| 418|Homo sapiens arrestin domain contain... 51 2e-06
BC028704-1|AAH28704.2| 418|Homo sapiens arrestin domain contain... 51 2e-06
BC032346-1|AAH32346.1| 433|Homo sapiens arrestin domain contain... 37 0.043
AL365502-13|CAI14589.1| 433|Homo sapiens arrestin domain contai... 37 0.043
AL365502-12|CAI14588.1| 271|Homo sapiens arrestin domain contai... 37 0.043
AL365502-11|CAI14587.1| 177|Homo sapiens arrestin domain contai... 37 0.043
BC113963-1|AAI13964.1| 262|Homo sapiens CADM4 protein protein. 31 2.2
AF363368-1|AAM60750.1| 388|Homo sapiens TSLC1-like 2 protein. 31 2.2
AC005525-1|AAC32740.1| 381|Homo sapiens F22162_1 protein. 31 2.2
AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9... 29 6.6
AK057068-1|BAB71359.1| 856|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette su... 29 6.6
AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette su... 29 6.6
>BC070100-1|AAH70100.1| 418|Homo sapiens arrestin domain containing
4 protein.
Length = 418
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 132 FYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEW----IEKETETYNGVKQYKQVRYY 299
+ SG+ V G V P+ ++AL +EA G A W + + + + + +V Y
Sbjct: 32 YSSGETVAGHVLLEASEPVALRALRLEAQGRATAAWGPSTCPRASASAAALAVFSEVEYL 91
Query: 300 GNEAYLRHTQHLVANNGQIQLSAGSQSLPFRFQIP-HTVPSTVAGERGNINYKITARL 470
LR A G I L G PFRFQ+P + ++ G+ G+I Y + A L
Sbjct: 92 NVRLSLREPP---AGEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGSIQYCVRAVL 146
>BC028704-1|AAH28704.2| 418|Homo sapiens arrestin domain containing
4 protein.
Length = 418
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 132 FYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEW----IEKETETYNGVKQYKQVRYY 299
+ SG+ V G V P+ ++AL +EA G A W + + + + + +V Y
Sbjct: 32 YSSGETVAGHVLLEASEPVALRALRLEAQGRATAAWGPSTCPRASASAAALAVFSEVEYL 91
Query: 300 GNEAYLRHTQHLVANNGQIQLSAGSQSLPFRFQIP-HTVPSTVAGERGNINYKITARL 470
LR A G I L G PFRFQ+P + ++ G+ G+I Y + A L
Sbjct: 92 NVRLSLREPP---AGEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGSIQYCVRAVL 146
>BC032346-1|AAH32346.1| 433|Homo sapiens arrestin domain containing
1 protein.
Length = 433
Score = 36.7 bits (81), Expect = 0.043
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = +3
Query: 129 VFYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNE 308
V+ G+ + G+V L P+ +A+ V G V K +T + E
Sbjct: 17 VYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT----------AWVVEE 64
Query: 309 AYLRHTQHLVANNGQIQLSAGSQSLPFRFQIPHTVPSTVAGERGNINYKITARL 470
Y + L A+ G L AG S PF+F +P T P++ G G I +++ A +
Sbjct: 65 GYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAI 115
>AL365502-13|CAI14589.1| 433|Homo sapiens arrestin domain
containing 1 protein.
Length = 433
Score = 36.7 bits (81), Expect = 0.043
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = +3
Query: 129 VFYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNE 308
V+ G+ + G+V L P+ +A+ V G V K +T + E
Sbjct: 17 VYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT----------AWVVEE 64
Query: 309 AYLRHTQHLVANNGQIQLSAGSQSLPFRFQIPHTVPSTVAGERGNINYKITARL 470
Y + L A+ G L AG S PF+F +P T P++ G G I +++ A +
Sbjct: 65 GYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAI 115
>AL365502-12|CAI14588.1| 271|Homo sapiens arrestin domain
containing 1 protein.
Length = 271
Score = 36.7 bits (81), Expect = 0.043
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = +3
Query: 129 VFYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNE 308
V+ G+ + G+V L P+ +A+ V G V K +T + E
Sbjct: 17 VYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT----------AWVVEE 64
Query: 309 AYLRHTQHLVANNGQIQLSAGSQSLPFRFQIPHTVPSTVAGERGNINYKITARL 470
Y + L A+ G L AG S PF+F +P T P++ G G I +++ A +
Sbjct: 65 GYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAI 115
>AL365502-11|CAI14587.1| 177|Homo sapiens arrestin domain
containing 1 protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.043
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = +3
Query: 129 VFYSGQIVTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNE 308
V+ G+ + G+V L P+ +A+ V G V K +T + E
Sbjct: 17 VYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT----------AWVVEE 64
Query: 309 AYLRHTQHLVANNGQIQLSAGSQSLPFRFQIPHTVPSTVAGERGNINYKITARL 470
Y + L A+ G L AG S PF+F +P T P++ G G I +++ A +
Sbjct: 65 GYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAI 115
>BC113963-1|AAI13964.1| 262|Homo sapiens CADM4 protein protein.
Length = 262
Score = 31.1 bits (67), Expect = 2.2
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Frame = +3
Query: 150 VTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNEAYLRHTQ 329
V +V F +DR ++ EA +A+ K+T+ V+ R + ++A +R
Sbjct: 54 VASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGD 113
Query: 330 HLV---ANNG-----QIQLSAGSQSLPFRFQI---PHTVPSTVAGERG 440
LV A G QI+ + G++SLP R + T+P V+ + G
Sbjct: 114 TLVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNG 161
>AF363368-1|AAM60750.1| 388|Homo sapiens TSLC1-like 2 protein.
Length = 388
Score = 31.1 bits (67), Expect = 2.2
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Frame = +3
Query: 150 VTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNEAYLRHTQ 329
V +V F +DR ++ EA +A+ K+T+ V+ R + ++A +R
Sbjct: 180 VASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGD 239
Query: 330 HLV---ANNG-----QIQLSAGSQSLPFRFQI---PHTVPSTVAGERG 440
LV A G QI+ + G++SLP R + T+P V+ + G
Sbjct: 240 TLVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNG 287
>AC005525-1|AAC32740.1| 381|Homo sapiens F22162_1 protein.
Length = 381
Score = 31.1 bits (67), Expect = 2.2
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Frame = +3
Query: 150 VTGSVNFTLDRPITVQALLVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNEAYLRHTQ 329
V +V F +DR ++ EA +A+ K+T+ V+ R + ++A +R
Sbjct: 158 VASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGD 217
Query: 330 HLV---ANNG-----QIQLSAGSQSLPFRFQI---PHTVPSTVAGERG 440
LV A G QI+ + G++SLP R + T+P V+ + G
Sbjct: 218 TLVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNG 265
>AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9
protein.
Length = 1624
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 261 MFQFLFRSTLQQLHQLPQQAKLEP*LVDLT*NLHFPLQF--DQNKTHLLIESNFMVPFSK 88
+F +LF S L Q+H PQ + ++ VD + ++ + F + T ++ PF K
Sbjct: 42 LFLYLFFSNLHQVHDTPQMSSMDLGRVDSFNDTNYVIAFAPESKTTQEIMNKVASAPFLK 101
Query: 87 PHSII 73
+I+
Sbjct: 102 GRTIM 106
>AK057068-1|BAB71359.1| 856|Homo sapiens protein ( Homo sapiens
cDNA FLJ32506 fis, clone SMINT1000042, weakly similar to
ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 3. ).
Length = 856
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 261 MFQFLFRSTLQQLHQLPQQAKLEP*LVDLT*NLHFPLQF--DQNKTHLLIESNFMVPFSK 88
+F +LF S L Q+H PQ + ++ VD + ++ + F + T ++ PF K
Sbjct: 42 LFLYLFFSNLHQVHDTPQMSSMDLGRVDSFNDTNYVIAFAPESKTTQEIMNKVASAPFLK 101
Query: 87 PHSII 73
+I+
Sbjct: 102 GRTIM 106
>AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 261 MFQFLFRSTLQQLHQLPQQAKLEP*LVDLT*NLHFPLQF--DQNKTHLLIESNFMVPFSK 88
+F +LF S L Q+H PQ + ++ VD + ++ + F + T ++ PF K
Sbjct: 42 LFLYLFFSNLHQVHDTPQMSSMDLGRVDSFNDTNYVIAFAPESKTTQEIMNKVASAPFLK 101
Query: 87 PHSII 73
+I+
Sbjct: 102 GRTIM 106
>AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 261 MFQFLFRSTLQQLHQLPQQAKLEP*LVDLT*NLHFPLQF--DQNKTHLLIESNFMVPFSK 88
+F +LF S L Q+H PQ + ++ VD + ++ + F + T ++ PF K
Sbjct: 42 LFLYLFFSNLHQVHDTPQMSSMDLGRVDSFNDTNYVIAFAPESKTTQEIMNKVASAPFLK 101
Query: 87 PHSII 73
+I+
Sbjct: 102 GRTIM 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,233,501
Number of Sequences: 237096
Number of extensions: 1279084
Number of successful extensions: 10159
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10159
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -