Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1588
(578 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070982-1|AAL48604.1| 306|Drosophila melanogaster RE07882p pro... 83 3e-16
AE014297-436|AAF51889.2| 306|Drosophila melanogaster CG1169-PA ... 83 3e-16
BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p pro... 48 9e-06
AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA ... 48 9e-06
BT015251-1|AAT94480.1| 390|Drosophila melanogaster LP14110p pro... 39 0.004
AE014297-414|AAN13234.1| 390|Drosophila melanogaster CG1148-PB,... 39 0.004
AE014297-413|AAF51907.2| 390|Drosophila melanogaster CG1148-PA,... 39 0.004
AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-P... 39 0.004
AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p pro... 39 0.006
AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA... 39 0.006
BT024980-1|ABE01210.1| 505|Drosophila melanogaster IP14820p pro... 36 0.030
AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-P... 36 0.030
AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p pro... 35 0.069
AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA... 35 0.069
AF132170-1|AAD34758.1| 286|Drosophila melanogaster unknown prot... 31 0.85
AE014297-418|AAF51903.2| 312|Drosophila melanogaster CG1151-PA ... 31 0.85
AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p pro... 30 2.6
AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA... 30 2.6
BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p pro... 29 3.4
AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-P... 29 3.4
AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein. 29 3.4
AY069648-1|AAL39793.1| 238|Drosophila melanogaster LD41421p pro... 28 7.9
AY061455-1|AAL29003.1| 334|Drosophila melanogaster LD40136p pro... 28 7.9
AE014298-1658|AAF48073.1| 238|Drosophila melanogaster CG2371-PB... 28 7.9
AE014296-2147|AAF49914.2| 334|Drosophila melanogaster CG10657-P... 28 7.9
>AY070982-1|AAL48604.1| 306|Drosophila melanogaster RE07882p
protein.
Length = 306
Score = 83.0 bits (196), Expect = 3e-16
Identities = 42/111 (37%), Positives = 65/111 (58%)
Frame = +1
Query: 106 ATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVEDDE 285
A A++L ++Y+ CL SV CV+P+ LQW +S E++ITE LSIV+T E
Sbjct: 28 APQSATQLALDMYHGCLKDLSVSCVRPKALQWFNSALRQPEVRITERLSIVRTA-----E 82
Query: 286 SADPRLAKDPAYEMFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTD 438
+ R + +P +FD +D +L SH+LR++ PE S A VP L+++
Sbjct: 83 KVESR-SMNPEERLFDDIDSYLGSHSLRIQAPEYFRTSEARSLVPDFLMSN 132
>AE014297-436|AAF51889.2| 306|Drosophila melanogaster CG1169-PA
protein.
Length = 306
Score = 83.0 bits (196), Expect = 3e-16
Identities = 42/111 (37%), Positives = 65/111 (58%)
Frame = +1
Query: 106 ATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVEDDE 285
A A++L ++Y+ CL SV CV+P+ LQW +S E++ITE LSIV+T E
Sbjct: 28 APQSATQLALDMYHGCLKDLSVSCVRPKALQWFNSALRQPEVRITERLSIVRTA-----E 82
Query: 286 SADPRLAKDPAYEMFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTD 438
+ R + +P +FD +D +L SH+LR++ PE S A VP L+++
Sbjct: 83 KVESR-SMNPEERLFDDIDSYLGSHSLRIQAPEYFRTSEARSLVPDFLMSN 132
>BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p
protein.
Length = 288
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 127 LVKNIYNECLSQYSVECVKPRTLQWMSSVAN-DDEIKITEDLSIVKTGTVEDDESADPRL 303
++ +IY++CL + SV CVK + ++ V D+ +TE +++V++ E+A +
Sbjct: 39 IMDSIYSDCLRKDSVSCVKYKLFSFVDKVLGARDQFALTEGVTVVRSPDAPQQEAA-RSI 97
Query: 304 AKDPAYE--MFDKVDKFLQSHTLRVKV 378
+ D ++E +++ FL SHT++V++
Sbjct: 98 SGDESFESLALNRISSFLNSHTIKVEL 124
>AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA
protein.
Length = 288
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 127 LVKNIYNECLSQYSVECVKPRTLQWMSSVAN-DDEIKITEDLSIVKTGTVEDDESADPRL 303
++ +IY++CL + SV CVK + ++ V D+ +TE +++V++ E+A +
Sbjct: 39 IMDSIYSDCLRKDSVSCVKYKLFSFVDKVLGARDQFALTEGVTVVRSPDAPQQEAA-RSI 97
Query: 304 AKDPAYE--MFDKVDKFLQSHTLRVKV 378
+ D ++E +++ FL SHT++V++
Sbjct: 98 SGDESFESLALNRISSFLNSHTIKVEL 124
>BT015251-1|AAT94480.1| 390|Drosophila melanogaster LP14110p
protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 145 NECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVED--------DESADPR 300
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 301 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 468
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 469 GE 474
G+
Sbjct: 207 GQ 208
>AE014297-414|AAN13234.1| 390|Drosophila melanogaster CG1148-PB,
isoform B protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 145 NECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVED--------DESADPR 300
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 301 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 468
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 469 GE 474
G+
Sbjct: 207 GQ 208
>AE014297-413|AAF51907.2| 390|Drosophila melanogaster CG1148-PA,
isoform A protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 145 NECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVED--------DESADPR 300
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 301 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 468
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 469 GE 474
G+
Sbjct: 207 GQ 208
>AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-PA
protein.
Length = 282
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +1
Query: 115 PASKLVKNIYNECLSQYS-VECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVEDD--- 282
P LV+ +Y++C + + C+K + L +S + D IKI + L++ K E +
Sbjct: 49 PEMALVRRVYDDCQDKNDFIGCLKQKALHALSRALDQDSIKIVDGLALEKQNQSETESIL 108
Query: 283 -ESADPRLAKDPA---YEMFDKVDKFLQSHTLRV 372
D R + + + K DK +++HTL++
Sbjct: 109 GSLTDARQFGNLSPIDRALLSKADKLMRTHTLKI 142
>AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p
protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.006
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Frame = +1
Query: 88 IVAFASATYPASKLVKN---IYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIV 258
I + A+AT A L+ + + +C + V C+K R L + A + ++++TE +++V
Sbjct: 11 IASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGDVRLTEGIALV 68
Query: 259 KTGTVEDDESADPRL------AKDPAYE--MFDKVDKFLQSHTLRVKVPEE 387
KT + S + A++ + + ++V +F +HTL+ KVP++
Sbjct: 69 KTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKD 119
>AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA
protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.006
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Frame = +1
Query: 88 IVAFASATYPASKLVKN---IYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIV 258
I + A+AT A L+ + + +C + V C+K R L + A + ++++TE +++V
Sbjct: 11 IASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGDVRLTEGIALV 68
Query: 259 KTGTVEDDESADPRL------AKDPAYE--MFDKVDKFLQSHTLRVKVPEE 387
KT + S + A++ + + ++V +F +HTL+ KVP++
Sbjct: 69 KTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKD 119
>BT024980-1|ABE01210.1| 505|Drosophila melanogaster IP14820p
protein.
Length = 505
Score = 36.3 bits (80), Expect = 0.030
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 94 AFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVAN-DDEIKITEDLS-IVKTG 267
A AS AS L + + C S+ E ++P+ + + DD+++I E S +V+
Sbjct: 309 AGASNASNASNLDYSSGDSC-SREGTEIIRPQAEPEIIDIDKVDDDVRIIEHQSGVVEIH 367
Query: 268 TVEDDESADPR--LAKDPAYE-MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLL 432
+EDDE +P K A E + + V K T+ E+I AA E +SL+
Sbjct: 368 EIEDDEKQEPAKDSTKSKANESIMENVSKSNHEETINKSSKEQIPTVAAEEVTFKSLV 425
>AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-PC,
isoform C protein.
Length = 804
Score = 36.3 bits (80), Expect = 0.030
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 94 AFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVAN-DDEIKITEDLS-IVKTG 267
A AS AS L + + C S+ E ++P+ + + DD+++I E S +V+
Sbjct: 608 AGASNASNASNLDYSSGDSC-SREGTEIIRPQAEPEIIDIDKVDDDVRIIEHQSGVVEIH 666
Query: 268 TVEDDESADPR--LAKDPAYE-MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLL 432
+EDDE +P K A E + + V K T+ E+I AA E +SL+
Sbjct: 667 EIEDDEKQEPAKDSTKSKANESIMENVSKSNHEETINKSSKEQIPTVAAEEVTFKSLV 724
>AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p
protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.069
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Frame = +1
Query: 121 SKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGT-----VEDDE 285
++L + +C + V C + ++ +V + ++ +T+ L K E +E
Sbjct: 153 NELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQDVNVTQRLKFFKNQVDYQVDKEKEE 212
Query: 286 SADPRLA--KDPAYE----MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSL 429
++ R A + P E ++ K KF +H L V +PE + A PR++
Sbjct: 213 HSEARAASAETPIEEVTSALYGKSIKFAMTHDLEVDLPEVMFNGATFRISPRAI 266
>AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA
protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.069
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Frame = +1
Query: 121 SKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGT-----VEDDE 285
++L + +C + V C + ++ +V + ++ +T+ L K E +E
Sbjct: 153 NELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQDVNVTQRLKFFKNQVDYQVDKEKEE 212
Query: 286 SADPRLA--KDPAYE----MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSL 429
++ R A + P E ++ K KF +H L V +PE + A PR++
Sbjct: 213 HSEARAASAETPIEEVTSALYGKSIKFAMTHDLEVDLPEVMFNGATFRISPRAI 266
>AF132170-1|AAD34758.1| 286|Drosophila melanogaster unknown
protein.
Length = 286
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +1
Query: 76 VLLSIVAFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSI 255
+LL ++ A++ + +CL S+ C++ + SV ++ +I++ +S+
Sbjct: 10 ILLLAAGISADPVKAAEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSL 69
Query: 256 VKTGTVEDDESADPRLAKDPA 318
VK+ +S D LA + A
Sbjct: 70 VKSNEGRQGKSLDNSLAVEAA 90
>AE014297-418|AAF51903.2| 312|Drosophila melanogaster CG1151-PA
protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +1
Query: 76 VLLSIVAFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSI 255
+LL ++ A++ + +CL S+ C++ + SV ++ +I++ +S+
Sbjct: 36 ILLLAAGISADPVKAAEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSL 95
Query: 256 VKTGTVEDDESADPRLAKDPA 318
VK+ +S D LA + A
Sbjct: 96 VKSNEGRQGKSLDNSLAVEAA 116
>AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p
protein.
Length = 280
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 112 YPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDE 228
+ + +L+ I ++C ++ C+K + L ++ +VAN +E
Sbjct: 37 HSSDELISTIVDKCFHANAMHCLKEKVLTYLDTVANVEE 75
>AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA
protein.
Length = 280
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 112 YPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDE 228
+ + +L+ I ++C ++ C+K + L ++ +VAN +E
Sbjct: 37 HSSDELISTIVDKCFHANAMHCLKEKVLTYLDTVANVEE 75
>BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p protein.
Length = 2240
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 300 TGQGSGLR--NVRQSGQVSPESYS*GESSRGDNEKCCFRVRAKVSLD 434
TGQ SG+ + R+ + SP+S+ G S RG+N + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYEASPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-PA
protein.
Length = 2240
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 300 TGQGSGLR--NVRQSGQVSPESYS*GESSRGDNEKCCFRVRAKVSLD 434
TGQ SG+ + R+ + SP+S+ G S RG+N + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYETSPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.
Length = 2240
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 300 TGQGSGLR--NVRQSGQVSPESYS*GESSRGDNEKCCFRVRAKVSLD 434
TGQ SG+ + R+ + SP+S+ G S RG+N + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYETSPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AY069648-1|AAL39793.1| 238|Drosophila melanogaster LD41421p
protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +1
Query: 196 QWMSSVANDDEIKITEDLSIVKTGTVEDDESADPRLAKDPAYEMFDKVDKFL----QSHT 363
Q SVA+ T S+ TG V+ +P +P Y + +++++ + Q
Sbjct: 37 QMSPSVASASATSSTVGTSVTTTGRVDSSTEENPTSNTEPEYTL-EELERLVGVPRQDFL 95
Query: 364 LRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLDGEDEAEV 489
L +K I + ++ + SL L EL L EDEA++
Sbjct: 96 LLIKTFSYILRRISTFIIKPSL---LQRELREKLQLEDEAKI 134
>AY061455-1|AAL29003.1| 334|Drosophila melanogaster LD40136p
protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 540 LDPQWFRELDLLLPALND 487
L PQWF++LD+ PA+N+
Sbjct: 104 LFPQWFKQLDINDPAINE 121
>AE014298-1658|AAF48073.1| 238|Drosophila melanogaster CG2371-PB,
isoform B protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +1
Query: 196 QWMSSVANDDEIKITEDLSIVKTGTVEDDESADPRLAKDPAYEMFDKVDKFL----QSHT 363
Q SVA+ T S+ TG V+ +P +P Y + +++++ + Q
Sbjct: 37 QMSPSVASASATSSTVGTSVTTTGRVDSSTEENPTSNTEPEYTL-EELERLVGVPRQDFL 95
Query: 364 LRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLDGEDEAEV 489
L +K I + ++ + SL L EL L EDEA++
Sbjct: 96 LLIKTFSYILRRISTFIIKPSL---LQRELREKLQLEDEAKI 134
>AE014296-2147|AAF49914.2| 334|Drosophila melanogaster CG10657-PA
protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 540 LDPQWFRELDLLLPALND 487
L PQWF++LD+ PA+N+
Sbjct: 104 LFPQWFKQLDINDPAINE 121
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.315 0.131 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,969,972
Number of Sequences: 53049
Number of extensions: 523646
Number of successful extensions: 1652
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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