Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1588
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.71 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   8.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.8  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 271 VEDDESADPRLAKDPAYEMFD--KVDKFLQSHTLRV 372
           +++DES  P+L   P +EM D  K+D  +    +RV
Sbjct: 82  LKNDESESPKLNPYPNWEMNDINKIDSIINIIRVRV 117


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 212 TDDIHCRVLGFTHSTEYWLR 153
           T  +HC V G T  T  WL+
Sbjct: 824 TATLHCEVHGDTPVTVTWLK 843


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 212 TDDIHCRVLGFTHSTEYWLR 153
           T  +HC V G T  T  WL+
Sbjct: 820 TATLHCEVHGDTPVTVTWLK 839


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 RPTKCSTKWTSFSR 355
           +PTK  ++W S+SR
Sbjct: 537 KPTKEDSEWPSYSR 550


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 366 KSMTLEKLVHFVEHF 322
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 280 DESADPRLAKDPAYEMFDKVDK 345
           D+S +  L+  P+++ FDK  K
Sbjct: 41  DDSDEEELSARPSFKTFDKGPK 62


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 366 KSMTLEKLVHFVEHF 322
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 366 KSMTLEKLVHFVEHF 322
           +S+T++KL+ + +HF
Sbjct: 77  ESVTVDKLITYFDHF 91


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 245 SSVILISSSLATDDIHCRVLGF 180
           +SVI  ++S  +DD++   LGF
Sbjct: 407 TSVIQAATSSVSDDLYLLELGF 428


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 498 QEEEDQAP*TIEDQEQTRVHQERYP 572
           Q+++ Q P   + Q+Q +  Q+R P
Sbjct: 834 QQQQQQQPQQQQQQQQQQQQQQRGP 858


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.131    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,968
Number of Sequences: 438
Number of extensions: 3015
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)