Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1587
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          27   0.18 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.18 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          27   0.18 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   6.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 522 KAKGIIIQNRSTKISHKPFT 463
           KAK  +I+ R  +++HKPFT
Sbjct: 480 KAKNTMIKARQYRLNHKPFT 499


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 522 KAKGIIIQNRSTKISHKPFT 463
           KAK  +I+ R  +++HKPFT
Sbjct: 480 KAKNTMIKARQYRLNHKPFT 499


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 522 KAKGIIIQNRSTKISHKPFT 463
           KAK  +I+ R  +++HKPFT
Sbjct: 106 KAKNTMIKARQYRLNHKPFT 125


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 3   ACVMRSEVSIHLSYISCPVRSLTYIH 80
           AC+  S ++I + YISCP  S+ + H
Sbjct: 177 ACI--SILAIKVYYISCPEISVNFAH 200


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 428 IWCFYLNIICF-NVNGLCEILVDRFCII 508
           +W  +  + C  ++  LC I VDRFC I
Sbjct: 116 LWVSFDVLSCTASILNLCMISVDRFCAI 143


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 304 NELTERTCRRMSYAYVSRCYGDRS 233
           N L E+T  R  YA+V    G RS
Sbjct: 464 NFLPEKTANRHYYAFVPFSAGPRS 487


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 372 VRSVRDFEILFVKTNYNISYGVFI*TLYVLT*TVYAKSW 488
           VR   +F +L V  N     G F+  +YV    +   SW
Sbjct: 225 VRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSW 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,444
Number of Sequences: 438
Number of extensions: 2839
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)