Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1586
         (563 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0290 - 16429495-16429559,16430040-16430316,16430410-164305...    29   3.4  
11_06_0351 - 22577666-22577989,22578282-22578676,22578961-225793...    27   7.8  

>09_04_0290 -
           16429495-16429559,16430040-16430316,16430410-16430571,
           16431308-16431926,16431976-16432172
          Length = 439

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 DIIKIFSS*PLVSMDPFSNINNHLSLGSFLFSCD 358
           D I + +   + S+D  S I+NHL++ S +FSCD
Sbjct: 103 DWILVLARRGVESLDLASPIHNHLAVHSSVFSCD 136


>11_06_0351 -
           22577666-22577989,22578282-22578676,22578961-22579308,
           22579449-22579583,22579664-22579731,22579804-22579869,
           22579970-22580041,22580143-22580286,22580392-22580463,
           22580805-22580872
          Length = 563

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 287 LVSMDPFSNINNHLSLGSFLFSCDFN 364
           L+ +  +S I NHL+ G  L SC+ N
Sbjct: 134 LLQVSHYSYIGNHLNCGQHLISCEGN 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,060,440
Number of Sequences: 37544
Number of extensions: 231833
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)