Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1585
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical pr...    32   0.16 
Z82284-3|CAB05293.1|  350|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory recep...    29   2.0  
Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    27   6.1  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      27   6.1  
Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical
           protein F28H7.1 protein.
          Length = 342

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 205 LIKMLKFNYRDAYSDKYSNRFVFAYKESFKYFITFKCYTITG 330
           L+ M   NYR A+S   S+ F   Y +  ++ I F+C  I+G
Sbjct: 60  LVPMCVLNYRYAFSVFVSDGFFEEYSDYHQFIIAFRCSLISG 101


>Z82284-3|CAB05293.1|  350|Caenorhabditis elegans Hypothetical
           protein T27E7.4 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
 Frame = +2

Query: 158 ENFRVPIQN---RNISITI*LKC*NLTIETRIVINIQIVSYLHIKSRLNILLHSNAIQLL 328
           +N R P+Q+   +   I + +K   +T+   +V+    +S+L I SR++ ++   A+Q+ 
Sbjct: 256 KNLRNPLQDYIFKQAMIMVVIKAILITVFLIMVLLDNRISWLMIASRMDQMVVVVAVQIS 315

Query: 329 AVKCF 343
           A+ CF
Sbjct: 316 AIICF 320


>U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory receptor
           family protein 5 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 217 LKFNYRDAYSDKYSNRFVFAYKESFKYFITFKCYTITGRKMFYIIKRA--LVSGLCHFTW 390
           L F   D ++ K +N     +  S  Y++ F   T+  +  FY++  +  L+S + HF  
Sbjct: 47  LDFVNSDGWARKINNAITGIFLISSMYYLGFMAKTMFYKSSFYVLDMSLQLLSMIWHFES 106

Query: 391 FLILIY 408
            L +I+
Sbjct: 107 ILSMIF 112


>Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical
           protein F57A8.4 protein.
          Length = 396

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 303 YIQMLYNYWP*NVLHYQE-GFSVRFMSF 383
           +I +L N WP N L +QE G S +F +F
Sbjct: 293 FIGILENVWPENTLLFQEDGSSTKFYTF 320


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 311  LNVIKYLNDSLYANTKRFEYLSLYASR*LNFNILIK 204
            LNV++  N +L A+ +  +Y+S+ +    NF I+IK
Sbjct: 3646 LNVLRAKNHTLMASNQTGQYISMLSRFEPNFEIVIK 3681


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 311  LNVIKYLNDSLYANTKRFEYLSLYASR*LNFNILIK 204
            LNV++  N +L A+ +  +Y+S+ +    NF I+IK
Sbjct: 3657 LNVLRAKNHTLMASNQTGQYISMLSRFEPNFEIVIK 3692


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 311  LNVIKYLNDSLYANTKRFEYLSLYASR*LNFNILIK 204
            LNV++  N +L A+ +  +Y+S+ +    NF I+IK
Sbjct: 3657 LNVLRAKNHTLMASNQTGQYISMLSRFEPNFEIVIK 3692


>Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical
           protein T19H5.1 protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 241 YSDKYSNRFVFAYKESFKYFITFKCYTITGRKMFYIIKRALVSGLCHFT 387
           YS   + R  F Y  S K ++TF+       K+ Y+ +  L+ G+C +T
Sbjct: 350 YSFDNATRNAFIYNSSTKIYLTFETDQSIVAKIEYVSEH-LLGGICIWT 397


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 311  LNVIKYLNDSLYANTKRFEYLSLYASR*LNFNILIK 204
            LNV++  N +L A+ +  +Y+S+ +    NF I+IK
Sbjct: 3657 LNVLRAKNHTLMASNQTGQYISMLSRFEPNFEIVIK 3692


>Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical
           protein W06G6.3 protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 233 ETRIVINIQIVSYLHIKSRLNILLHSNAIQLL 328
           +T I++N+Q+V  LH++S + IL     + L+
Sbjct: 215 KTTILLNMQLVKALHLQSAIPILTFLAVLNLI 246


>Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical
           protein R09D1.10 protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 214 MLKFNYR-DAYSDKYSNRFVFAYKESFKYFITFKCYTITGRKMFYIIKRALVSGLCHFTW 390
           +L+  Y+ ++YS    +R  F Y  + K ++TF+       K+ Y+  RAL +G+  + W
Sbjct: 352 VLEKGYKLNSYSYDELSRSAFIYNSTTKEYLTFETEKSIEAKVNYVKDRAL-AGV--WIW 408

Query: 391 FLIL 402
           F+ L
Sbjct: 409 FVDL 412


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,205,203
Number of Sequences: 27780
Number of extensions: 213780
Number of successful extensions: 508
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)