Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1582
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0234 + 15187065-15188241,15188316-15188494 118 5e-27
04_03_0649 - 18402976-18403220,18403305-18404499 110 1e-24
01_01_1102 - 8734984-8736090,8736430-8736557,8736671-8736708,873... 35 0.085
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 33 0.20
08_02_1632 + 28386956-28387042,28387120-28387185,28387354-283874... 32 0.45
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 29 3.2
09_02_0134 + 4717220-4717431,4717654-4717765 29 3.2
04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565... 29 3.2
02_01_0247 - 1632425-1632646,1632873-1632958,1633209-1633332,163... 29 3.2
09_02_0328 - 7293547-7293855,7294161-7294274,7294348-7294429,729... 29 4.2
07_01_1217 - 11624586-11624936,11625311-11625424,11625495-116255... 29 4.2
06_01_0911 - 7031099-7031779,7031896-7032221,7032306-7032318,703... 29 4.2
03_02_0300 - 7246312-7246662,7246757-7246831,7246920-7246993,724... 29 4.2
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 29 5.6
12_02_0749 - 22758317-22760407 28 7.4
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 28 7.4
06_03_0521 + 21724447-21724594,21724795-21725342 28 9.8
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 28 9.8
02_04_0196 + 20835495-20837255 28 9.8
>11_04_0234 + 15187065-15188241,15188316-15188494
Length = 451
Score = 118 bits (284), Expect = 5e-27
Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Frame = +3
Query: 3 AIEFLRDYQFNGLDVDWEYPRGADDRAAFVSLLKELRLAFEGEAKTSGQPRLLLTAAVPA 182
+IE R F+GLD+ W +P D LL E R ++ T LLLTA V
Sbjct: 146 SIELARANGFDGLDLAWRFPATQLDMENLGDLLAEWRAEIMEDSTTRSTEPLLLTATVYF 205
Query: 183 SFEAIAAG-----YDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLFPLESATSYQKKL 347
S Y + ++S LD++N++T+ H ++PL+ +S S
Sbjct: 206 SNHLFGMADTNLNYPIDDMSSSLDWVNIITFSLHKN-SNVTTADAPLYDKDSHFS----- 259
Query: 348 TVDYSAREWVRQGAPKEKLMIGMPTYGRSFTLINETQYDIGAPASEGGEAGRFTNEAGFM 527
Y W+ G P KL++G+P +GRS+ L N+ + +GAP + G R +N+ G +
Sbjct: 260 -ASYGVISWLDAGLPPCKLVMGIPLFGRSWFLRNKDKNGLGAPTAAAGTKQRKSNQIGVI 318
Query: 528 SYYEICEFLREDNTTLVWDNEQMVPFAYRGDQWVGFDDERSLKTKMAWLKEKGFGGIMVW 707
+Y EI E+L+ + + DN+ + + Y GD WV FD ++ K+ ++ + G +
Sbjct: 319 AYAEIEEYLKSQSVFVTHDNQSVADYFYSGDLWVSFDSAVVVQEKVEFVAKSQLLGYFLS 378
Query: 708 SVDMDD 725
++ DD
Sbjct: 379 TISFDD 384
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 110 bits (264), Expect = 1e-24
Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 12/253 (4%)
Frame = +3
Query: 3 AIEFLRDYQFNGLDVDWEYPRGADDRAAFVSLLKELRLAFEGEAKTSGQPR-LLLTAAVP 179
A++ R+ F+GLDV W +P A + A F L+ E R A PR LLTA V
Sbjct: 151 AVKVARENGFDGLDVAWRFPASAVEMAEFGFLVAEWRAAV---------PRGFLLTATVY 201
Query: 180 AS---FEAIAAGYDVPE--ISKYLDFINVMTYDFHGQWERQVGHNSPLFPLESATSYQKK 344
S F+A AG D P +++ LD++NVM + + PL S+
Sbjct: 202 FSNHVFDAPFAGVDYPSETVARSLDWVNVMAFGLRPPGAANANATAFDAPLYDRASHY-- 259
Query: 345 LTVDYSAREWVRQGAPKEKLMIGMPTYGRSFTLINETQYDIGAPASEGGEAGRFTNEAGF 524
+ Y W+ G P K+++G+P YGRS+ L N+ +GAP G R +N G
Sbjct: 260 -SASYGVVSWLDAGVPASKVVMGIPLYGRSWFLRNKANSGVGAPVVAAGPKQRGSNATGA 318
Query: 525 MSYYEICEFLREDNT------TLVWDNEQMVPFAYRGDQWVGFDDERSLKTKMAWLKEKG 686
MSY E+ ++L T +DN + + GD WV FD + K+A+ G
Sbjct: 319 MSYAEV-QWLAATATRGSRAVITAYDNASVASYVSVGDVWVAFDGVAVVAEKLAFAARCG 377
Query: 687 FGGIMVWSVDMDD 725
G +W V+ DD
Sbjct: 378 LLGYFLWPVNYDD 390
>01_01_1102 -
8734984-8736090,8736430-8736557,8736671-8736708,
8736815-8737030,8737252-8737413,8738381-8738559,
8738693-8738799,8738918-8739082,8739201-8739284,
8739364-8739559
Length = 793
Score = 34.7 bits (76), Expect = 0.085
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 748 PVPQKPRKSSMSTDQTMIPPNPFSFSQAIFVLSDLSSSNPTHWSPR*ANGTICS 587
PVP + R SS+ + M+P N + +S ++ +W+P +GT CS
Sbjct: 537 PVPPRRRPSSVYAESVMVPVNAAPWQSECSSECSMSLTSDMNWTPSIRDGTECS 590
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = -1
Query: 381 GGPTRGRSSPQLVSSGSSWRFREGTADCCARPGAPTGRGSHKSSRL*SPNISIFPVHHIR 202
GG RG++ P L S + G D G PT RG + S N S+ H+
Sbjct: 385 GGCRRGQNCPYLHEEASQSQMGLGAPDEPGYTGGPTTRGDYLSWS--EQNNSVQASSHVL 442
Query: 201 QRSPRTTPVQQ 169
R R PV Q
Sbjct: 443 SRDDRENPVPQ 453
>08_02_1632 +
28386956-28387042,28387120-28387185,28387354-28387449,
28387534-28387609,28387884-28387972,28388041-28388133,
28390389-28390526,28390709-28390814,28391521-28391627
Length = 285
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -3
Query: 781 SCFMVVMSGNLPVPQKPRKSSMSTDQTMIPPNPFSFSQAIFVL 653
S + V+ G P P P +SS D+ ++P NPF +A+F+L
Sbjct: 61 SAAVSVLLGFAPPPSLPAQSSSKLDKLLLP-NPFDRPRAVFLL 102
>10_08_0838 - 20927020-20927207,20927288-20927491,20927654-20928297,
20928549-20928788,20928884-20928978,20929087-20929434,
20929824-20930042,20930422-20930487,20931191-20931362,
20931456-20931703,20931933-20932073,20932238-20932330,
20932421-20932471,20933571-20933693,20933793-20934035,
20934131-20934211,20935245-20935340,20935535-20936320,
20936443-20937012,20937322-20937427,20938102-20938206,
20938311-20938432,20939321-20939413,20940081-20940104
Length = 1685
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/100 (23%), Positives = 44/100 (44%)
Frame = +3
Query: 234 LDFINVMTYDFHGQWERQVGHNSPLFPLESATSYQKKLTVDYSAREWVRQGAPKEKLMIG 413
L FI +TY+ G+ + + L +Y +L SA + ++ + +
Sbjct: 1151 LGFICTLTYNISGKDSAA----AVIHKLPGQLNYSTQLKFIISALDALQPNKRFQLPQLS 1206
Query: 414 MPTYGRSFTLINETQYDIGAPASEGGEAGRFTNEAGFMSY 533
MP S+ +++E +I + GGE+ +F G +SY
Sbjct: 1207 MPPRLTSYEVMSEVHSNIALGNAIGGESDKFLRVDGGLSY 1246
>09_02_0134 + 4717220-4717431,4717654-4717765
Length = 107
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 384 PGGPTRGRSSPQLVSSGSSWRFREGTADCCARPGAPTGRGSHKSSRL*SPNISIFPVHHI 205
PGG GRS+ V+ + W+ +G+ +P P G + L PN+ + P H
Sbjct: 43 PGG---GRSTTAAVAGRAQWQKEQGSGSTRRQP-YPKLAGMSHTHLLKGPNVLVGPTHPY 98
Query: 204 RQR 196
Q+
Sbjct: 99 SQK 101
>04_04_0456 -
25355409-25355751,25356047-25356205,25356317-25356513,
25356602-25356794,25357044-25358287
Length = 711
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +2
Query: 275 VGAPGRAQQSAVPSRKRHELPEETNCGLLRPRVGPPGCPQREADDRHAHVRKVLHAYQRN 454
V APG + + P P P P +R+AD H+H R + H Q++
Sbjct: 235 VAAPGNSTDAPAPPLNSTATPRAAAAAAATPSTPP----ERKADTHHSHRRGIRHKQQQH 290
>02_01_0247 -
1632425-1632646,1632873-1632958,1633209-1633332,
1633622-1633729,1634297-1634378,1634718-1634770,
1634866-1634949,1635092-1635249,1635326-1635805,
1636340-1636709
Length = 588
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -1
Query: 405 SASLWGHPGGPTRGRSSPQLVSSGSSWRFREGTADCCARPGA 280
SA G G P RGR VS G R+R G A A GA
Sbjct: 11 SAGASGGRGSPGRGRVVGSAVSFGGRGRWRRGVAVVAAGAGA 52
>09_02_0328 -
7293547-7293855,7294161-7294274,7294348-7294429,
7295318-7295401,7296199-7296399,7296516-7296853,
7296968-7297084
Length = 414
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +3
Query: 507 TNEAGFMSYYEICEFLREDNTT---LVWDNEQMVPFAYRGDQWVGFDDERSLKTKMAWLK 677
T+E Y+ L++D T +W V +GD V ++D + + W
Sbjct: 23 TDETMLADYFGTIGLLKKDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFN 82
Query: 678 EKGFGG 695
K F G
Sbjct: 83 NKDFHG 88
>07_01_1217 -
11624586-11624936,11625311-11625424,11625495-11625576,
11626762-11626845,11627430-11627639,11627756-11628099,
11628215-11628331
Length = 433
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +3
Query: 507 TNEAGFMSYYEICEFLREDNTT---LVWDNEQMVPFAYRGDQWVGFDDERSLKTKMAWLK 677
T+E Y+ L++D T +W V +GD V ++D + + W
Sbjct: 23 TDETMLAEYFGTIGLLKKDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFN 82
Query: 678 EKGFGG 695
K F G
Sbjct: 83 NKDFHG 88
>06_01_0911 -
7031099-7031779,7031896-7032221,7032306-7032318,
7032402-7032414,7032498-7032510,7032592-7032790
Length = 414
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 75 DRAAFVSLLKELRLAFEGEAKTSGQPRLLL----TAAVPASFEAIAAGYDV 215
D AAF+ LL+ RLAF G++ Q L+ TAA P E ++V
Sbjct: 150 DPAAFLRLLRGKRLAFVGDSTARNQAEALVCHLATAARPGHSEDYGMAHEV 200
>03_02_0300 -
7246312-7246662,7246757-7246831,7246920-7246993,
7247247-7247334,7247464-7247615,7247702-7247861,
7247940-7248095,7248181-7248396,7248808-7249065,
7249816-7250019,7251334-7251423
Length = 607
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 570 TLVWDNEQMVPFAYRGDQWVGFDDERSLK 656
T W++E+ VPF Y G + V +E+ L+
Sbjct: 451 TFAWEDERSVPFLYDGARLVAILEEQKLR 479
>07_01_1105 -
10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 670 QAIFVLSDLSSSNPTHWSPR*ANGTICSLSQTSVVLSSRR 551
+ + VL D+ NP HW A + C+ T VV + R
Sbjct: 292 RCLLVLDDVWDDNPNHWDTITAQLSFCAPGSTVVVTTRSR 331
>12_02_0749 - 22758317-22760407
Length = 696
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 763 MSGNLPVPQKPRKSSMSTDQTMIPPNPFSFSQAIFVLSD 647
+SG P+ P +SS+ST PP+P ++A +L++
Sbjct: 20 LSGANRRPETPPRSSLSTKSAANPPDPADPARAASILAE 58
>01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 297 CARPGAPTGRGSHKSSRL*SPNISIFPVHHIRQRSPRTTPV 175
C+ AP G ++KSS+L P+ S+ ++RQ T PV
Sbjct: 1093 CSPDRAPPGFETYKSSQLLLPSPSLAQTTNVRQDQSVTEPV 1133
>06_03_0521 + 21724447-21724594,21724795-21725342
Length = 231
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 310 NSGLLCPTWRSHWP 269
+S LLCPTW SH P
Sbjct: 61 HSCLLCPTWHSHTP 74
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 135 KTSGQPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVM 254
K S PR +L++A P+ E VP++ K D+++++
Sbjct: 2119 KISMFPRKMLSSAYPSLCEFFTEACGVPKVPKTSDYVDIL 2158
>02_04_0196 + 20835495-20837255
Length = 586
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 694 PPNPFSFSQAIFVLSDLSSSNPT 626
PP PF+FS + L+ SSS+P+
Sbjct: 62 PPTPFTFSLLLAALASSSSSSPS 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,759,305
Number of Sequences: 37544
Number of extensions: 597651
Number of successful extensions: 2198
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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