Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1579
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.046
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 32 0.11
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 30 0.33
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.99
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 29 0.99
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.99
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 27 2.3
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.0
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 4.0
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 5.3
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 26 7.0
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 26 7.0
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 7.0
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 7.0
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 7.0
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 9.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.3
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 33.1 bits (72), Expect = 0.046
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHA 408
AP AP+VH+ + A + SAP AP EAP+ PA + P
Sbjct: 520 APVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPV 579
Query: 409 TSAIHQVPA 435
+VP+
Sbjct: 580 APVAPEVPS 588
Score = 32.7 bits (71), Expect = 0.061
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 244 AAPAVHEASSYQ--AAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSA 417
A P+V S Q AA + AP+ H PA AP +AP +A AP++ A
Sbjct: 505 AQPSVITPSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPA 564
Query: 418 IHQVP 432
+ VP
Sbjct: 565 VPVVP 569
Score = 31.9 bits (69), Expect = 0.11
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +1
Query: 226 EAPTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIH 405
EAP+ H PA A +A +AP AP+ + P P A S AP
Sbjct: 525 EAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAP 584
Query: 406 ATSAIHQVP 432
++ Q P
Sbjct: 585 EVPSVPQPP 593
Score = 30.7 bits (66), Expect = 0.25
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHAT 411
P AAP V EA S +H P VAP AP AAP A + PA+
Sbjct: 515 PQPPAAPVVPEAPS------VHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVV 568
Query: 412 SAIHQVP 432
VP
Sbjct: 569 PEALSVP 575
Score = 29.5 bits (63), Expect = 0.57
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 298 SAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSAIHQVPA 435
S P AP EAP+ H PAA A +AP A + + P+
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPS 558
Score = 28.7 bits (61), Expect = 0.99
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHA 408
AP AP+V + A + S P P EAP+ PAA + P A
Sbjct: 595 APVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPA 654
Query: 409 TSAIHQVPA 435
+ + P+
Sbjct: 655 VPVVPEAPS 663
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 298 SAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSAIHQVPA 435
+AP AP+ + P AP SA AP + ++ Q PA
Sbjct: 519 AAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPA 564
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQ------AAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTA 393
P A P V EA S A + S P VAP EAP+ P A A +
Sbjct: 560 PQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSV 619
Query: 394 PAIHATSAIHQVPA 435
P A + + P+
Sbjct: 620 PQRPAVPVVPEAPS 633
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +1
Query: 226 EAPTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIH 405
E P+ PAV + +AP P+ + P P A S AP +
Sbjct: 615 EVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
Query: 406 ATSAIHQVPA 435
++ Q PA
Sbjct: 675 EVPSVPQPPA 684
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/69 (24%), Positives = 24/69 (34%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHA 408
AP AP+V + + S P VAP E P+ P A + P
Sbjct: 550 APVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPV 609
Query: 409 TSAIHQVPA 435
+VP+
Sbjct: 610 APVAPEVPS 618
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/69 (24%), Positives = 24/69 (34%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHA 408
AP P+V + S P VAP E P+ PA + P A
Sbjct: 580 APVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPA 639
Query: 409 TSAIHQVPA 435
+ +VP+
Sbjct: 640 APVVPEVPS 648
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 497 PPQLDMKIIMLTNMPTLNTDTLTRLKTLTPATTNLNTRPVMVTSSRVNTPSCNLMVHSAR 676
PP + T PT + ++ T T+ P TT++NT V+ ++ VNT + A
Sbjct: 97 PPTTSLNTTTTTAPPTTHVNSTT---TVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHAN 153
Query: 677 SPTLLTTT 700
+ + + TT
Sbjct: 154 TTSFVPTT 161
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 440 IQHQLFMKLQLFTFPPHFTP--PQLDMKIIML 529
+QH LF KL+L PPH P P LD+ L
Sbjct: 342 LQHSLFFKLKLKFLPPHKLPWIPSLDVSSFSL 373
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 0.99
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHAT 411
P + P A S A Q + AP + VAP +AP A S+ AP
Sbjct: 1427 PLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLP 1486
Query: 412 SAIHQVP 432
A+ VP
Sbjct: 1487 PAVPNVP 1493
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 28.7 bits (61), Expect = 0.99
Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Frame = +2
Query: 437 TIQHQLFMKLQLFTFPPHFTPPQLDMKIIMLTNM--PT--LNTDTLTRLKTLTPATTNLN 604
T H+ +++ + PH PP+ D+ + +N P+ +++ +T++ + L+
Sbjct: 77 TTDHKKYVESSYAAYDPHDQPPERDVSLKESSNKINPSNFFDSEQITKINAVKKRFPALD 136
Query: 605 TRPVMVTSSRVNTPSCNLMVHSARSPTLL---TTTMGFNAVVHNTPSRDTSSLELE 763
+ ++ T + N N+ +H LL +T+ +A N + SS++ E
Sbjct: 137 SEMIIATLEKFNWRE-NITIHKLTFQKLLGRGNSTINKSAQKLNNQPIEKSSVDKE 191
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 0.99
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = +2
Query: 422 TRSPPTIQHQLFMKLQLFTFPPHFTPPQLDMKIIMLTNM-----PTLNTDTLTRLKTLTP 586
T + P ++ + ++ T P + I T M PT+ T TL TP
Sbjct: 213 TTTTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLPTAAMTTP 272
Query: 587 ATTNLNTRPV--MVTSSRVNTPSCNLMVHSARSPTLLTTT 700
T V M+T + V T + MV + +PT++TTT
Sbjct: 273 VEETTTTPMVETMITPTVVTTTTP--MVETMITPTVVTTT 310
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 530 TNMPTLNTDTLTRLKTL-TPATTNLNTRPVMVTSSRVNTPSCNLMVHSARSPTLLTTTMG 706
T P T T ++T+ TP + T +V S V+T + + +PT+ TTT+
Sbjct: 206 TTTPMEETTTTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLP 265
Query: 707 FNAVVHNTPSRDTSS 751
A+ TP +T++
Sbjct: 266 TAAM--TTPVEETTT 278
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 599 LNTRPVMVTSSRVNTPSCNLMVHSARSPTLLTTTMGFN 712
L+++ + T ++N S NL + + PTL+ GFN
Sbjct: 370 LSSKNLTSTLFKLNADSSNLKIGNGHLPTLIDCNTGFN 407
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 542 TLNTDTLTRLKTLTPATTN----LNTRPVMVTSSRVNTPSCNLMVHSARSPT 685
+L +TR L PA+ + L+++PV V S+ +N P+ +L + S S T
Sbjct: 248 SLPISDVTRALPLAPASNSQHPSLSSQPVSVPSNTINIPTDSLSIVSNPSQT 299
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 244 AAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAP 396
+APA E S+ SAP V+P P AAPA + Y+ P
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPP 191
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 623 TSSRVNTPSCNLMVHSARSPTLLTTTMGF-NAVVHNTPSRDTS 748
T + +TP+ N ++ + PT T ++ F N NT ++ TS
Sbjct: 332 TITNASTPAANTIISRSSKPTDTTNSISFANTTPENTSTQITS 374
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 529 QHNDLHVQLRRREVRWKREQLELHEQL 449
Q +L L+R+E+ ++REQ+EL +L
Sbjct: 63 QLENLKNDLKRKELEFEREQIELQRKL 89
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 527 LTNMPTLNTDTLTRLKT---LTPATTNLNTRPVMVTSSRVNTPSCNLMVHSARSPTLLTT 697
++ + +T T L T TP ++ N VM T +R + HS+ +
Sbjct: 538 ISETKSFSTKASTPLSTDDIATPLSSAPNPPSVMPTYARKTSSHSERSSHSSYHNSSHVP 597
Query: 698 TMGFNAVVHNTPSRDTSSL 754
T FN+ + T ++ TS +
Sbjct: 598 TAAFNSPIMRTSTKSTSPI 616
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 446 HQLFMKLQLFTFPPHFTPPQLDMKIIMLTNMPTLNTDTLTRLKTLTPATTN-LNTRPVMV 622
H + L T PH P Q + ++ + + TLTR ++T + N + R +
Sbjct: 185 HARSVILSPITDMPHLAPLQRKNSNASIHSLGSSSRPTLTRTPSITSRSVNSVTERSKSL 244
Query: 623 TSSRVNTPSCNLMVHSARSPTLL 691
+ R+ L + + R P L
Sbjct: 245 SKGRIENQFGQLYLLAGRVPNAL 267
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 707 NPLWWSAV*VTLRNEPSGCRREYSPLTTSPSRV 609
NPLWW A+ + +E ++ PL T +
Sbjct: 949 NPLWWDAINTLMNDETIQGLGDHLPLFTKDGTI 981
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 226 EAPTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIH 405
E + ++A + SSY A+ + ++ + +VAP + + +A SAT+Y P
Sbjct: 167 EVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVAS-SSEISAGSATSY--VPTSS 223
Query: 406 ATSAIHQVPA 435
++ A+ V A
Sbjct: 224 SSIALSSVVA 233
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 482 PPHFTPPQLDMKIIMLTNMPT-LNTDTLTRLKTLTPATTNLNTRPVMVTSSRVNTPSCNL 658
P H TPP + L+ +PT L + + L T T +T + V V L
Sbjct: 161 PEHLTPPSSFITAKQLSRLPTPLPPPSSSSLPTGTISTNSFCPYERKVQPEHVTKELHQL 220
Query: 659 MVHSARSP 682
+ H+ SP
Sbjct: 221 LQHNTPSP 228
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 9.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 659 SGCRREYSPLTTSPSRVSC*DLWS 588
SG Y + SP+++ C D+W+
Sbjct: 525 SGSSSTYPAIDLSPAKIGCLDIWN 548
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/66 (22%), Positives = 38/66 (57%)
Frame = +2
Query: 578 LTPATTNLNTRPVMVTSSRVNTPSCNLMVHSARSPTLLTTTMGFNAVVHNTPSRDTSSLE 757
L+ +T++ ++ + ++SS + S S SP+ +++++ ++ + ++P+ TSSL
Sbjct: 580 LSSSTSSPSSTSLSISSS---STSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLM 636
Query: 758 LEVCSI 775
+ SI
Sbjct: 637 ISSSSI 642
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,134,109
Number of Sequences: 5004
Number of extensions: 65249
Number of successful extensions: 228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -