Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1579
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0305 + 2041370-2043114,2043764-2044121 37 0.021
02_01_0302 - 2021221-2023305 36 0.027
11_04_0137 + 13909204-13909315,13910002-13910999,13911058-139112... 31 1.4
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 30 1.8
03_04_0101 - 17283293-17284009 30 2.4
12_02_0883 - 23982022-23982825 29 3.2
11_04_0113 - 13590161-13590678,13590817-13590997 29 3.2
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 3.2
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 29 4.2
03_05_1107 - 30444481-30445161 29 4.2
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284... 29 4.2
02_01_0037 + 261405-261779,261880-262065,262185-262271,262341-26... 29 4.2
02_03_0279 + 17250347-17252098 29 5.5
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 29 5.5
08_02_1245 - 25557201-25558199 28 7.3
02_04_0413 + 22681957-22682035,22682253-22682788 28 7.3
02_01_0059 + 430227-430268,430347-430724 28 7.3
07_03_1107 - 24024387-24024497,24025799-24026410 28 9.6
03_05_0210 - 22018050-22018382,22018496-22018646,22018841-22019052 28 9.6
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757 28 9.6
02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512... 28 9.6
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 36.7 bits (81), Expect = 0.021
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +1
Query: 244 AAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSA 417
AA A H A++ +A + +A H A A + HAA A SA T TA A ++SA
Sbjct: 14 AAAARHAAAAPSSAATLAAAAARHAAAASSSSAARHAAAAPSSAATLATAAAPSSSSA 71
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHA 408
A T AA A H A++ ++ A H+A AP+ AAP++ SA T A A +
Sbjct: 27 AATLAAAAARHAAAASSSSAARHAA----AAPSSAATLATAAAPSSSSAATL-AAAAAPS 81
Query: 409 TSAIHQVP 432
++A+ +P
Sbjct: 82 SAAVAVLP 89
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 283 AQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSA 417
A + +A H A A A T AA A H+A ++ A HA +A
Sbjct: 9 ALPLAAAAARHAAAAPSSAATLAAAAARHAAAASSSSAARHAAAA 53
>02_01_0302 - 2021221-2023305
Length = 694
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 241 HAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSAI 420
H +P SY + + + P+YH P G P++ + P++ +A H+ P T
Sbjct: 483 HPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQSTPTHPS 542
Query: 421 HQVP 432
+ P
Sbjct: 543 YPSP 546
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 232 PTYHAAPAVHEAS--SYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIH 405
P+ H+ P ++ SY + + H +P G P+Y + P++ + +YH+ P H
Sbjct: 454 PSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGH 513
Query: 406 ATSAIHQVP 432
T + H P
Sbjct: 514 TTPS-HPSP 521
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREA-PTYHAAPAAHS 372
P+YH+ P H S+ + + +AP H P P+Y + P ++
Sbjct: 504 PSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYT 551
>11_04_0137 +
13909204-13909315,13910002-13910999,13911058-13911267,
13911522-13912056,13912154-13912461
Length = 720
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/118 (24%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Frame = +1
Query: 238 YHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSA--TTYHTAPAIHAT 411
Y AA H+ S+Q + AP Y AG PT AP T + P A+
Sbjct: 526 YEAAHTSHDRPSFQ----LTPAPEYTRGSAGSGVPTSSTAPPRPQVFQTPPYVQPTQGAS 581
Query: 412 SAIHQVPAYXXXXXXXXXXXXXXXTALHAASAGHEDHYVDEYAHPKYGYSYSVEDPHT 585
+ H P A GH H DEY + P T
Sbjct: 582 GSAH-FPYMPTGDNVLNTPAWGLHITPRAPEQGHTQHTYDEYGSASTHHGMPAYSPRT 638
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 238 YHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTY 384
+H APA H A A + P+ P G AP+ AAPAA +AT Y
Sbjct: 67 HHGAPAPHPGRRSPPAPAPANPPSSDPMPGG--APS--AAPAAGAATVY 111
>03_04_0101 - 17283293-17284009
Length = 238
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 535 IRQHNDLHVQLRRREVRWKREQL 467
+R H D Q RRREV W+ +Q+
Sbjct: 177 VRVHRDYQAQSRRREVAWEAKQI 199
>12_02_0883 - 23982022-23982825
Length = 267
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 482 PPHFTPPQLDMKIIMLTNMPTL--NTDTLTRLKTLTPATTNLNTRPVMVTSSRVNTPSCN 655
P H P ++ M+I + N+P ++ ++ LKTL P TN + + + V+T N
Sbjct: 181 PDHKDPSRMQMQIKLDLNLPPHDDSSSSMDDLKTLAPTDTN-SDKETNTGNGGVDT---N 236
Query: 656 LMVHSARSPTLLTTTMGFNAVVHNTPSRDTSS 751
+ HS P+ + T N + N P R+ SS
Sbjct: 237 IPDHS--DPSAMQTK---NKLDFNLPPRNDSS 263
>11_04_0113 - 13590161-13590678,13590817-13590997
Length = 232
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 334 EAPTYHAAPAAHSATTYHTAPAIHATSA 417
E+PT A PAA +A H A IH +A
Sbjct: 47 ESPTIRATPAAQAAANQHAACNIHEVTA 74
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 529 DEYAHPKYGYSYSVEDPHTG-DHKSQHETRDGDVVKGEYSLLQPD-GSFRKVTYTAD 693
D+ PK ++E+ T H+S HE R G + SL++PD G+ K+ AD
Sbjct: 2662 DDITSPKASQEDALEEVGTELPHESLHENRHGAKDEQTLSLIEPDTGNAEKLPNEAD 2718
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 301 APTYHVAPAGREA-PTYHAAPAAHSATTYHTAPAIH 405
+P+Y + PAG A P Y + PA+H Y T+ H
Sbjct: 170 SPSYALPPAGYPAVPPYQSYPASHVPAPYPTSAYPH 205
>03_05_1107 - 30444481-30445161
Length = 226
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 247 APAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTA 393
A H+ + QAI + T+ + G P AAPA A T TA
Sbjct: 87 AAVQHQGIDWLGVQAIKPSSTWRASVRGETTPLSAAAPAPSRARTKSTA 135
>03_01_0366 -
2848449-2849032,2849155-2849233,2849346-2849608,
2849742-2849862
Length = 348
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 262 EASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTY 384
+ S + A +A +APA EA TYH +P H Y
Sbjct: 229 KGKSIEVAGPSTAAAAASMAPAPAEASTYHVSPYGHGYFAY 269
>02_01_0037 +
261405-261779,261880-262065,262185-262271,262341-262420,
262518-262599,262794-262814,263204-263249,263365-263483,
263685-263798,263885-263959,264068-264157,264604-264713,
264902-265160
Length = 547
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 685 CR*PCGMNHQVAGGSIHP*----RRHHHGSRVEICGRRCEGLQPSKSIRI*GGH 536
C P + A G +HP ++ HH R +CG RC+ L I GGH
Sbjct: 103 CGAPLQTADEAAPGYVHPATYDLKKRHHQLRTVLCG-RCKLLSHGHMITAVGGH 155
>02_03_0279 + 17250347-17252098
Length = 583
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 238 YHAAPAVHEAS-SYQAAQAIHS-APTYHVAPAGREAPTYHAAPAAHSATTYHTAPAI 402
++ AP++H+ + Q +H A + APA EAP+ A AA A P +
Sbjct: 55 FYPAPSMHQNHIEAEEGQLLHVLADPFAAAPAAAEAPSGETAIAAVGAAAEEATPTL 111
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/65 (36%), Positives = 26/65 (40%)
Frame = +1
Query: 244 AAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSAIH 423
AAP A +AA AP APA AP+ A P A PA AT IH
Sbjct: 79 AAPPPPPAEG-EAAPPPADAPPPEEAPAAEPAPSEAAPPPPAEADQAAAPPATDAT-VIH 136
Query: 424 QVPAY 438
V Y
Sbjct: 137 MVHDY 141
>08_02_1245 - 25557201-25558199
Length = 332
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 68 SYIMARRYRLRISCAMIKPSTTRRPFTTLPYMLLPWHRLLLKSMLLQLFTPSKRLQPTMQ 247
S+ +A R+R + A P T+ P +P++ LP+ + + L PS RL T
Sbjct: 86 SFAIANRHRHPVVSAGHHPLLTQSPHDLVPFIELPFRHIHPLAAALDAI-PSPRLLGTHM 144
Query: 248 PQQSTRLLPTK 280
P LLP +
Sbjct: 145 PH---HLLPPR 152
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 123 HPPRDAHSLHFPTCCSRGTGCS*NPCCSSYSHHPRGSNLPCSPS 254
HPP P CC GC N C G P SPS
Sbjct: 94 HPPPSPSPCVHPPCCESAAGCCCNGCSGGGC---GGGQCPPSPS 134
>02_01_0059 + 430227-430268,430347-430724
Length = 139
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 375 CRVSSWS-CMVGRSFAACWSYMVGRGRVDCLSCLVGR 268
C+ WS G+ FA + +G+GR+ C + VGR
Sbjct: 44 CQRGQWSVAAAGKDFAGRNHHGIGKGRLRCSAAEVGR 80
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAG----REAPTYHAAPAAHSATT 381
PT AAPA +S + A +APT PA APT A PA A T
Sbjct: 26 PTPAAAPATTPPASSKKTPAPAAAPTTTTPPAASTPPAAAPTTPATPAPAEAPT 79
>03_05_0210 - 22018050-22018382,22018496-22018646,22018841-22019052
Length = 231
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 238 YHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAA 366
YHAA + A+S A A P H A A +AP AA AA
Sbjct: 103 YHAAGRLTGAASAMLAVATCGMPLQHGAVARGQAPEEKAAMAA 145
>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
Length = 397
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 229 APTYHAAPAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHA--APAAHSATTYHTAPAI 402
AP+Y + PA H+A+ Y QA++ P A YHA +P T H P
Sbjct: 168 APSY-SRPAPHDAAPY---QALYGGPYAAATARTPAAAAYHAQVSPFHLQLDTTHPHPPP 223
Query: 403 HATSAIHQVPAY 438
S H+ AY
Sbjct: 224 SYYSMDHKEYAY 235
>02_01_0687 -
5118774-5119412,5120359-5120424,5120636-5120690,
5120795-5121354
Length = 439
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 223 QEAPTYHAAPAVHEASSYQAAQAIHS-APTYHVAP--AGREAPTYHAAPAAHSATTYHTA 393
QE P+Y A SSY AQA AP V+P +G + P Y A AA + + + A
Sbjct: 378 QEQPSYGHAQL---PSSYGLAQASFPFAPAQGVSPYGSGAQPPQYGAGQAATNPGSAYQA 434
Query: 394 P 396
P
Sbjct: 435 P 435
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,589,222
Number of Sequences: 37544
Number of extensions: 533698
Number of successful extensions: 1870
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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