Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1579
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    27   0.20 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        26   0.45 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.6  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 625 VVKGEYSLLQPDGSFRKVTYTADHHNGFQ 711
           V +G  S   PDG    +TY AD  NGFQ
Sbjct: 70  VSQGSDSYTAPDGQQVSITYVAD-ENGFQ 97


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 247 APAVHEASSYQAAQAIHSAPTYHVAPAGREAPTYHAAPAAHSATTYHTAPAIHATSAIH 423
           +PA     S  +A A+ +A   +       +PT   +   HS ++  T+PA   TS+++
Sbjct: 33  SPATASLESSLSAAAVAAAAVNYAQQHNSPSPT--GSSPQHSGSSASTSPAARTTSSMY 89


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +2

Query: 539 PTLNTDTLTRLKTLTPATTNLNTRPVMVTSSRVNTP 646
           P     T+T   T T  TT   T P    ++   TP
Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTP 689


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 493 HAASAGHEDHYVDEYAHPKYGYSYSVED 576
           +  +  +   Y+ EY  P+Y   Y +ED
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMED 227


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 660 WFIPQGHLHC*P 695
           W++P G  HC P
Sbjct: 240 WYLPSGGCHCKP 251


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 204 SSYSHHPRGSNLPCSPSSPRGFF 272
           S+   +P G +   SPSSP  FF
Sbjct: 78  STSPSYPGGGSSSPSPSSPSSFF 100


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 240 PCSPSSPRG 266
           PC+PS PRG
Sbjct: 393 PCTPSPPRG 401


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,820
Number of Sequences: 438
Number of extensions: 4877
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)