Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1577
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 32 0.50
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.88
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.88
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 30 1.5
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 30 1.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 2.0
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 29 3.5
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 3.5
U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 29 3.5
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 29 3.5
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 28 6.2
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 28 6.2
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 28 6.2
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 28 6.2
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 28 8.2
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 8.2
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 8.2
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 8.2
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 28 8.2
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 8.2
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 28 8.2
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.2
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 8.2
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 8.2
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 8.2
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 8.2
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +3
Query: 519 KKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPIL 698
K + T TP+T T P+ STP TT +T T PT PT +K+ P P
Sbjct: 169 KSTPTTPTTMKSTPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTT 226
Query: 699 PS 704
P+
Sbjct: 227 PT 228
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +3
Query: 519 KKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPIL 698
K + T TP+T T P+ STP TT +T T PT PT +K+ P P
Sbjct: 283 KSTPTTPTTMKSTPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTT 340
Query: 699 PS 704
P+
Sbjct: 341 PT 342
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPS 704
TP+T T P+ STP TT +T T PT PT +K+ P P P+
Sbjct: 207 TPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTTPT 254
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPS 704
TP+T T P+ STP TT +T T PT PT +K+ P P P+
Sbjct: 233 TPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTTPT 280
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 555 TPSTKLTAPSEPL---STPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPS 704
TP+T + P+ P STP TT +T T PT PT +K+ P P P+
Sbjct: 278 TPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTTPT 329
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPS 704
TP+T T P+ STP TT +T T PT PT +K+ P P P+
Sbjct: 321 TPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTTPT 368
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPS 704
TP+T T P+ STP TT +T T PT PT +K+ P P P+
Sbjct: 347 TPTTP-TTPTTMKSTPTTPTTPTTMKSTPTTPT-TPTTMKSTPTTPTTPT 394
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPT 665
T LT P+ P TTA TA V+ T PT PT
Sbjct: 641 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 677
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 558 PSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
PS+ + P + + TT S A V T PT PT +P P
Sbjct: 588 PSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSP 632
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPT 665
T LT P+ P TTA TA V+ T PT PT
Sbjct: 697 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 733
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 558 PSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
PS+ + P + + TT S A V T PT PT +P P
Sbjct: 644 PSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSP 688
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPT 665
T LT P+ P TTA TA V+ T PT PT
Sbjct: 520 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 556
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPT 665
P +K+ VTQ +A P T +AP + +TP ++ +V P P+
Sbjct: 424 PAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPS 474
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = +2
Query: 254 VSSQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSY------HSAP 415
V+ +I + QP Y APVA +A PAP+ H AP ++ H AP
Sbjct: 359 VAPAHITQEIQPAPQPYVAPVAPVAQEIHTIQPIQPAPI--HPAPLQPAHVVQETAHVAP 416
Query: 416 VAKIVAHQ 439
K+VA +
Sbjct: 417 ETKVVAEE 424
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -3
Query: 290 GADHDG*CSGKRRTQQTNSGLEQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHG 123
G G CSG R + + G HG+ G G G G HRG RHG
Sbjct: 287 GHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGS-------GHHRGGRHG 335
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -3
Query: 206 GQHGKPQGQRGKLQEPQRHNEHRGFRHGVR 117
G HG P + P RH H HG R
Sbjct: 395 GHHGPPHHHHHDGRSPSRHGHHHHHHHGCR 424
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPPILPSLNIS 716
TPS ++A P+++PL T+S + + P+ P + P P L ++S
Sbjct: 581 TPSAVVSALPTPMNSPLPRVTSSKSAQDVSTPSTTPNPVSRSPDPVALVKDSVS 634
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPT 653
P+K + T TP+T T P+ +TP TT +T T PT
Sbjct: 80 PSKPKPSTTTTTTTTPTTTTTTPTTTTTTPT--TTTTTPTTTTTTPT 124
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 305 AAPVAKLAVATPV--TYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQA 442
+ P A + A P T APA VT AAPAAV+ +A VA A
Sbjct: 192 SGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAA 239
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 555 TPSTKLTAPSEPLSTPLMHTTA-STAVVHNTGPTGGPTHIKAVP 683
TP+T T P+ +TP TTA +T T T PT VP
Sbjct: 174 TPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVP 217
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 510 SPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGP 689
SP++KS++ + T +T+ P++ + T TTA +A+ T P I+ P
Sbjct: 205 SPSRKSSSDST-PTPTQATQFDMPTQ-IQTASPPTTADSAIFPPTSPESIIQKIEQFPSN 262
Query: 690 PILPSLNI 713
ILP+ +I
Sbjct: 263 QILPNFDI 270
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +2
Query: 239 SSAESVSSQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPV 418
S+ S SSQ+ + Q NY + + ++ T P PV + + SYH+
Sbjct: 578 SAYNSQSSQHQTKSIPVQ--NYQSSNYNKSYSSQTTTQHQPQPVAANNN-YSTSYHTERS 634
Query: 419 AKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGDAVKGS 553
+ A Q + IA P + N S + HS G ++K +
Sbjct: 635 STTTAQQPQTIALPPPQNNSSHTETHSSTGPIMMHSPGGHSMKST 679
>U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical
protein C32D5.7 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 651 TGGPTHIKAVPGPPILPSLNIS 716
TGG + P PP++PSLN S
Sbjct: 361 TGGTPPVHRNPSPPVIPSLNFS 382
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 350 HAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQ 517
+AAPAP + A PA + SAP IVA + A P ++ + V D +G ++S+
Sbjct: 80 YAAPAP--FAAQPAQFAVQSAPPQPIVAPPPQAYAAP-HKRHVDVMDIDTGVDQSE 132
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 308 APVAKLAVATPVTYHAA-PAPVTYHAAPAAVS-YHSAPVAKIVAHQAEEIAY 457
APV + VA P AA PAP AAPAA + +AP A ++++ AY
Sbjct: 108 APVEQAPVAVPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAY 159
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 308 APVAKLAVATPVTYHAA-PAPVTYHAAPAAVS-YHSAPVAKIVAHQAEEIAY 457
APV + VA P AA PAP AAPAA + +AP A ++++ AY
Sbjct: 436 APVEQAPVAVPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAY 487
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = +2
Query: 293 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQ--AEEI--AYP 460
T N A+ VA+ AV TP APAP A S AP A + A E A P
Sbjct: 250 TANAASAVAEPAVETP-----APAPAAEETPAPATSSEEAPAPAPTAEETPAPETVSAAP 304
Query: 461 KYEYNYSVADGHSGDNKSQQEVRDGDAVKGSYSFHEADGSIRTVEYTADAH 613
+ +Y A G + + DA + S AD + V+ ++ H
Sbjct: 305 EAANSYDSAGGDAATAPAPSS-EAADAAAPTDSAASADTTAALVDTSSSEH 354
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PSEPLSTPLMHTTASTAVVHNTGPT---GGPTHIKAVPGPPILP 701
P +P P TAS T PT G P + GPP+ P
Sbjct: 217 PPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPP 260
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +3
Query: 510 SPNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPT 653
+P KK+ T T H P T T E STP H+T AV+ T PT
Sbjct: 127 TPKKKTTTTT----HAPLT--TKMRE--STPATHSTTERAVITTTVPT 166
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PSEPLSTPLMHTTASTAVVHNTGPT---GGPTHIKAVPGPPILP 701
P +P P TAS T PT G P + GPP+ P
Sbjct: 217 PPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPP 260
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PSEPLSTPLMHTTASTAVVHNTGPT---GGPTHIKAVPGPPILP 701
P +P P TAS T PT G P + GPP+ P
Sbjct: 217 PPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPP 260
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +3
Query: 516 NKKSATVTQ*RAHTPSTKLTAPSEPLST--------PLMHTTASTAVVHNTGPTGGPTHI 671
+ KS +T + TP T LTA S P S+ P+ HT S + +T PT T
Sbjct: 186 SSKSPMMTS--SDTPKTPLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPN 243
Query: 672 KAVPGP 689
++P P
Sbjct: 244 GSIPSP 249
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +2
Query: 308 APVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIA 454
APV A A Y APAPV A A +Y APVA + A +A
Sbjct: 83 APVVAAAPALAPAY--APAPVVAAAPAFAPAYAPAPVASPMIAAAPALA 129
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 603 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 659
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 603 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 659
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 281 DQPQTINYAAPVAK---LAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEI 451
DQ ++IN A P A A P T A P + + AA ++V+HQA
Sbjct: 355 DQKKSINSANPFANDVASAAPAPATSAAQPDLLDMFQSSAAPLLQCNRKLQMVSHQAAPF 414
Query: 452 AYP 460
YP
Sbjct: 415 GYP 417
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P+ + T T A T T PS P+S + T +STA + P G T I A P
Sbjct: 600 PSVSNTTTTT--ATVAPTSSTVPSTPVSNVMAATISSTA-KNTPSPAGSVTTINATFSKP 656
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +3
Query: 516 NKKSATVTQ*RAHTPSTKLTAPSEPLST--------PLMHTTASTAVVHNTGPTGGPTHI 671
+ KS +T + TP T LTA S P S+ P+ HT S + +T PT T
Sbjct: 186 SSKSPMMTS--SDTPKTPLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPN 243
Query: 672 KAVPGP 689
++P P
Sbjct: 244 GSIPSP 249
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +2
Query: 308 APVAKLAVATPVTYHAAP----APVTYHAAPAA 394
AP A++A TPV AP AP T AAPAA
Sbjct: 256 APAAEVAPETPVAAPMAPAAPAAPATPEAAPAA 288
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 513 PNKKSATVTQ*RAHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGPTGGPTHIKAVPGPP 692
P ++ T++ TPS+ APS STP T S A + TG +GGP P PP
Sbjct: 732 PTAETFTLSNFWLTTPSS---APSIVPSTP----TISPAPLPTTGSSGGPD--VTTPAPP 782
Query: 693 IL 698
++
Sbjct: 783 VM 784
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 293 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPK 463
T+ P + +V V +APAP+++ AA AA ++ + K A + A P+
Sbjct: 196 TVTEVQPPVEESVTATVPTSSAPAPISF-AAVAAAAHRKEALRKHQAQNPQPAAPPR 251
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 549 AHTPSTKLTAPSEPLSTPLMHTTASTAVVHNTGP-TGGPTHIKAVP 683
A TP+T +T PS ++ P T T VV N P+ + VP
Sbjct: 364 ATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVP 409
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 293 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPK 463
T+ P + +V V +APAP+++ AA AA ++ + K A + A P+
Sbjct: 196 TVTEVQPPVEESVTATVPTSSAPAPISF-AAVAAAAHRKEALRKHQAQNPQPAAPPR 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,941,022
Number of Sequences: 27780
Number of extensions: 271467
Number of successful extensions: 1214
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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