Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1576
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    34   0.004
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   1.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.9  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +2

Query: 575 PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVP 679
           PY ++V+V++P ++ +    P  +EK +PY V+ P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKP 231



 Score = 31.9 bits (69), Expect = 0.019
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 572 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPV 682
           VP+ V + V  P+ VKV +P PY ++  +   +K+P+
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPI 212



 Score = 28.7 bits (61), Expect = 0.18
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 596 VDKPYEVKVKVPTPYTVEKKIPYEVKVP 679
           V+KPY ++V+ P P  V KK  +EV VP
Sbjct: 228 VEKPYPIEVEKPFPVEVLKK--FEVPVP 253



 Score = 26.2 bits (55), Expect = 0.96
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 569 KVP-YEV--KVHVDKPYEVKVKVPTPYTVEKKIPYEV 670
           K+P Y+V  KV ++KP    V+ P P  VEK  P EV
Sbjct: 209 KIPIYKVIPKV-IEKPVPYTVEKPYPIEVEKPFPVEV 244



 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 596 VDKPYEVKVKVPTPYTVEKKIPYEVKV 676
           V  P   KV VP P+ V   +P+ VKV
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKV 192


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 361 AHQNC*GGKEGACSVYSRETRPLY 432
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 73   FLLL-GKGNHGQRCHQNNRV 17
            FLL+ GK +HG+  H+ NRV
Sbjct: 961  FLLVNGKISHGELLHRMNRV 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,719
Number of Sequences: 2352
Number of extensions: 10842
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)