Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1574
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901... 31 0.61
02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448 31 0.61
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 28 3.3
04_03_0513 - 16681227-16683936,16685572-16685966 28 3.3
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 3.3
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 28 4.3
08_01_0666 + 5748821-5749249 27 5.7
05_05_0065 - 22069798-22069890,22070878-22071160,22071240-220713... 27 5.7
01_07_0342 - 42860548-42862343,42863345-42863396,42863666-428638... 27 5.7
01_06_1435 + 37351653-37351990,37352241-37352424 27 5.7
01_06_0664 + 30999365-31002089,31002220-31002686 27 5.7
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 27 5.7
12_01_0992 + 10067834-10068133 27 7.5
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 27 7.5
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 7.5
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 27 7.5
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 27 10.0
08_01_0086 - 629043-629594 27 10.0
05_04_0398 - 20946852-20947214 27 10.0
>10_08_0132 +
15087274-15087797,15089544-15089732,15090048-15090186,
15090454-15090594,15091420-15091569,15091908-15092011,
15092258-15092432,15092714-15092823,15092906-15093073,
15093180-15093345,15093771-15094049,15094445-15094543,
15094619-15094676,15095145-15095336,15095693-15095724,
15096023-15096117,15096321-15096426
Length = 908
Score = 30.7 bits (66), Expect = 0.61
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = -3
Query: 253 NSGLXQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKLPQQMSSGPVPPGD 74
+SG+ +LQG GKPQ QRG+ + H G R G + P ++ S P P
Sbjct: 274 HSGVASGYSLQG--GKPQQQRGEFGRLRFLPRHAGVARRRRRRGGRSPFRLVS-PSHPPP 330
Query: 73 QLGTTPQMRTVLL 35
T P M T+ L
Sbjct: 331 LSKTEPMMDTLEL 343
>02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448
Length = 495
Score = 30.7 bits (66), Expect = 0.61
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = -3
Query: 247 GLXQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKLPQQMSSGPVPPGDQL 68
G+ QH QG+ G QG+R ++P++H H + R P+ + PVP +
Sbjct: 422 GIEQH---QGKLGVDQGKRPAPEKPRQHWPHVDQLAPLADGSRSTPESRVADPVPITETS 478
Query: 67 GTTPQMRTVLLIWKT 23
+ ++ L W T
Sbjct: 479 PRHSRRASLSLKWTT 493
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 298 DHHASCSGKRRTQQTNSGLXQHGTLQGQHGKPQGQRGKLQEPQRHNEHRG 149
DH AS RR+ S +HG H +RG Q+H+ HRG
Sbjct: 79 DHAASRGRGRRSGDATSASSRHGGGHADHAVRDVRRGGNVSTQQHH-HRG 127
>04_03_0513 - 16681227-16683936,16685572-16685966
Length = 1034
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 3 FTAKNQNVFQINSTVRICGVVPSWSPGGTGPLLIC 107
F +KN V I+ R+ GV+P +S G L+C
Sbjct: 322 FGSKNLRVVDISYNFRLSGVLPDFSSGSALTELLC 356
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 292 HASCSGKRRTQQTNSGLXQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKL 113
H S + T +S Q Q +G P Q G +PQ + +G G+K
Sbjct: 581 HPGYSSQPPTSAASSYPVQGSAPQSGYGAPPPQTGYGTQPQPQGGYSQGSYGAPPQGQKA 640
Query: 112 PQQMSS-GPVPP 80
P S G PP
Sbjct: 641 PPNTSPYGQAPP 652
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 353 PVDLPRWPCPCYLPRRPCWRVLPLWPSSQNR 445
P D P P PC +P P +R WP+ ++R
Sbjct: 138 PPDHPPPPPPCRVPPPPGYRQPMAWPARRDR 168
>08_01_0666 + 5748821-5749249
Length = 142
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 245 STIRLLSAS--LART*CVMIRAQTINYAAPVAKLAVATPVDLPRWPCPCYLP 394
S RLLS S L T ++ + I+ A+ +A +TP P W PCY P
Sbjct: 7 SAHRLLSLSPGLPPTVRGLLLSVAISNASTSLGMARSTPSVAPSWSSPCYGP 58
>05_05_0065 -
22069798-22069890,22070878-22071160,22071240-22071335,
22071456-22071558,22071633-22071693,22071816-22071887,
22072315-22072383,22072459-22072482,22073278-22073316,
22073862-22073951,22074063-22074095
Length = 320
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 235 HGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRH 140
H L G HG P +R + Q RH+E H
Sbjct: 277 HKLLNGNHGDPTDRRQRAQMNGRHDEDINHAH 308
>01_07_0342 -
42860548-42862343,42863345-42863396,42863666-42863848,
42864288-42864461,42864528-42864962
Length = 879
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 181 QEPQRHNEHRGFRHGVRCSGRKLPQQ 104
QE Q H E R R+G RKLP++
Sbjct: 68 QEGQHHKEERDERYGFEIQVRKLPKR 93
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 223 QGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGR 119
+G GKP+G+ + P +EHR F G+ GR
Sbjct: 90 RGGGGKPRGEERRRGVPWSEDEHRLFLEGLDRYGR 124
>01_06_0664 + 30999365-31002089,31002220-31002686
Length = 1063
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3
Query: 139 GVRCSGRKLPQQMSSGPVPPGDQLGTTPQMRTVLLIWKTF*FFAVK 2
GVR P SSG V PG + G +LL+ FFAV+
Sbjct: 628 GVRSCNAGSPGSASSGGVSPGLRAGLLVAGAALLLVIVALAFFAVR 673
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -3
Query: 289 ASCSGKRRTQQTNSGLXQHGTLQGQHGKPQGQRGKLQEPQRHNEHRGFRHGVRCSGRKLP 110
A C +R ++ + L QGQ G+ + ++ +R + +G R CS +L
Sbjct: 2 AGCGARRAAREALAQLAVGQLGQGQEEDVLGREKEGKDGERKKKKKGRRTSTACSAERLS 61
Query: 109 QQMSS 95
SS
Sbjct: 62 HVKSS 66
>12_01_0992 + 10067834-10068133
Length = 99
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 316 IDSLGPDHHASCSGK-RRTQQTNSGLXQHGTLQGQHGKPQGQRGKLQEPQR 167
+D + P H SG+ RR ++T++G + G ++ Q G G RG+++E ++
Sbjct: 3 LDDVAPAHGGGGSGRGRRVRKTDAG-EEGGGVRPQRG---GGRGEVEEERK 49
>06_03_0191 -
17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 37 IVLCAFVALSQAGLLAEPVHYSSAGAVSS 123
I LC F++ SQ LLA PV SSA V S
Sbjct: 354 ITLCLFLSWSQ--LLATPVELSSAAQVHS 380
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 CVMIRAQTINYAAPVAKLAVATPVDLPRWPCPCYLPRRPCWRVLPL-WPS 433
C +++ I A P + V+ P P Y+PR P +R L + W S
Sbjct: 12 CGFAQSRMIYLAPPEESFCSRSRVNRPAHPARVYVPRNPQFRALVVCWRS 61
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 317 YAAPVAKLAVATPVDLPRWP-CPCYLP 394
Y+APVA + T +DLP+ P P +P
Sbjct: 339 YSAPVASTSTVTIIDLPKTPFVPSVVP 365
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 362 LPRWPCPCYLPRRPCWRVLP 421
LP WPC + RR R+LP
Sbjct: 20 LPPWPCASHAQRRRVLRLLP 39
>08_01_0086 - 629043-629594
Length = 183
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 446 CDFGCWARVVAPASRAGVVGNRGRASVVGPRV*RRLTWLR 327
C GCW R A R G R R + G RV R +LR
Sbjct: 134 CGDGCWWRGGAEERRGEGAGRRWRRAEEGARVAGRHGFLR 173
>05_04_0398 - 20946852-20947214
Length = 120
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 199 GQRGKLQEPQRHNEHRGFRHGVRCSGRKLPQQMSSGPVPP 80
G R K + P + G G CS R+ PQ ++ P PP
Sbjct: 61 GMRRKQRPPA---QLAGMEIGTACSSRRWPQLLTRRPQPP 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,354
Number of Sequences: 37544
Number of extensions: 228423
Number of successful extensions: 892
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -