Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1573
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            31   2.9  
AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.     30   6.7  

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -3

Query: 558  THNTTHVNDPSAG---SPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTSLNHSIG 388
            T  TTH+ +PS G   +P  T  TT TS+   S  + P++ T   PP  G  T+  H+  
Sbjct: 2652 TLGTTHITEPSTGTSHTPAATTGTTTTSTPALSSPH-PSSRTTESPPSPG-TTTPGHTTA 2709

Query: 387  SS 382
            +S
Sbjct: 2710 TS 2711



 Score = 30.3 bits (65), Expect = 5.0
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -3

Query: 549  TTHVNDPSAGSPTETLVTTFTSSK*SSLVN--FPTTPTAVKPPRVGPKTSLNHSIGSS 382
            TTH+ +PS G+      TT T+   +  ++   P++ T   PP  G  T+  H+ G+S
Sbjct: 2126 TTHITEPSTGTSHTPAATTGTTQPSTPALSSPHPSSRTTESPPSPG-TTTPGHTRGTS 2182



 Score = 29.5 bits (63), Expect = 8.8
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -3

Query: 558  THNTTHVNDPSAGSPTETLVTTFTSSK*SSLVN--FPTTPTAVKPPRVGPKTSLNHSIGS 385
            T  TTH+ +PS G+      TT T+   +  ++   P++ T   PP  G  T+  H+  +
Sbjct: 1425 TLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPG-TTTPGHTTAT 1483

Query: 384  S 382
            S
Sbjct: 1484 S 1484


>AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 549 TTHVNDPSAGSPT-ETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTSLNHS 394
           T+H  + +  SP   TL TT T S  +S   +PT+PT+      G  TS+ +S
Sbjct: 426 TSHTTNLTRSSPLLATLPTTITRSTPTSETTYPTSPTSTVK---GSTTSIRYS 475


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,765,403
Number of Sequences: 237096
Number of extensions: 1897371
Number of successful extensions: 4468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4467
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)