Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1573
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122212-1|AAM52724.1|  658|Drosophila melanogaster LP07906p pro...    30   1.9  
AE014296-3604|AAF51767.2|  706|Drosophila melanogaster CG32447-P...    30   1.9  
AE014296-3603|AAS65094.1|  658|Drosophila melanogaster CG32447-P...    30   1.9  
AY051411-1|AAK92835.1|  751|Drosophila melanogaster GH09153p pro...    30   2.6  
AE014297-3430|AAF56217.1|  751|Drosophila melanogaster CG13604-P...    30   2.6  
BT023877-1|ABA81811.1|  864|Drosophila melanogaster SD12752p pro...    29   4.5  
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    29   4.5  
AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA...    29   4.5  

>AY122212-1|AAM52724.1|  658|Drosophila melanogaster LP07906p
           protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 552 NTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTSLNHSIGS 385
           N   V  PS+ + T T  TT T++  +S     TTP A +  R   +  LN   G+
Sbjct: 49  NAYQVLKPSSRNATSTTTTTSTTTSTTSSTTSTTTPAAPQTQRSAKQLDLNFPGGN 104


>AE014296-3604|AAF51767.2|  706|Drosophila melanogaster CG32447-PA,
           isoform A protein.
          Length = 706

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 552 NTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTSLNHSIGS 385
           N   V  PS+ + T T  TT T++  +S     TTP A +  R   +  LN   G+
Sbjct: 49  NAYQVLKPSSRNATSTTTTTSTTTSTTSSTTSTTTPAAPQTQRSAKQLDLNFPGGN 104


>AE014296-3603|AAS65094.1|  658|Drosophila melanogaster CG32447-PB,
           isoform B protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 552 NTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTSLNHSIGS 385
           N   V  PS+ + T T  TT T++  +S     TTP A +  R   +  LN   G+
Sbjct: 49  NAYQVLKPSSRNATSTTTTTSTTTSTTSSTTSTTTPAAPQTQRSAKQLDLNFPGGN 104


>AY051411-1|AAK92835.1|  751|Drosophila melanogaster GH09153p
           protein.
          Length = 751

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 558 THNTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGP 415
           +HN TH ++P+  +PT  + T  +SS  +S+   P     V+PP   P
Sbjct: 420 SHNLTHQHNPN--TPTIEITTNMSSSS-TSMSKQPVDEILVEPPAAQP 464


>AE014297-3430|AAF56217.1|  751|Drosophila melanogaster CG13604-PA
           protein.
          Length = 751

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 558 THNTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGP 415
           +HN TH ++P+  +PT  + T  +SS  +S+   P     V+PP   P
Sbjct: 420 SHNLTHQHNPN--TPTIEITTNMSSSS-TSMSKQPVDEILVEPPAAQP 464


>BT023877-1|ABA81811.1|  864|Drosophila melanogaster SD12752p
           protein.
          Length = 864

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 531 PSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTS 406
           P AG    T  TT T+   SS    P +PT   PP   P +S
Sbjct: 819 PKAGGSVTTTTTTITTK--SSPSPAPASPTTAAPPTSAPASS 858


>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
           protein.
          Length = 3166

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 531 PSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPPRVGPKTS 406
           P AG    T  TT T+   SS    P +PT   PP   P +S
Sbjct: 860 PKAGGSVTTTTTTITTK--SSPSPAPASPTTAAPPTSAPASS 899


>AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA
           protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 558 THNTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFPTTPTAVKPP 427
           T +TT     +  +PT T  TT T +  +S    PTT TA   P
Sbjct: 181 TSSTTTTPTTTKTTPTTTTPTTTTQTTRTSTTTTPTTTTATTTP 224



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = -3

Query: 558 THNTTHVNDPSAGSPTETLVTTFTSSK*SSLVNFP--TTPTAVKPPRVGPKTS 406
           T  TT        +PT T  TT T +  +S    P  TTPT   P    P T+
Sbjct: 229 TKTTTTPTTTPTSTPTTTTTTTTTQTTGTSTTTTPTTTTPTTTTPTITTPTTT 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,658,009
Number of Sequences: 53049
Number of extensions: 563662
Number of successful extensions: 1522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)