Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1572
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    33   0.007
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   1.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 33.5 bits (73), Expect = 0.007
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 615 VKVPTPYTVEKKIPYEVKVPVSPALHCREKVPVP 716
           ++ P PYTVEK  P EV+ P    +  + +VPVP
Sbjct: 220 IEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVP 253



 Score = 31.5 bits (68), Expect = 0.028
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 600 PYEVKVKVPTPYTVEKKIPYEVKVPVSPALHCREKVPVPVEI 725
           P+ VKV +P PY ++  +   +K+P+   +    + PVP  +
Sbjct: 187 PHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTV 228



 Score = 28.7 bits (61), Expect = 0.20
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 588 TFDKPYEVKVKVPTPYTVEKKIPYEVKVP 674
           T +KPY ++V+ P P  V KK  +EV VP
Sbjct: 227 TVEKPYPIEVEKPFPVEVLKK--FEVPVP 253



 Score = 27.5 bits (58), Expect = 0.45
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 588 TFDKPYEVKVKVPTPYTVEKKIPYEVKVPVSPALHCREKVPVPVEI 725
           T   P   KV VP P+ V   +P+ VKV +      +  V  P++I
Sbjct: 165 TVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 594 DKPYEVKVKVPTPYTVEKKIPYEVKVPVSPALHCREKVPVPVEI 725
           ++P ++ +    P  +EK +PY V+ P    +   EK P PVE+
Sbjct: 205 EQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEV---EK-PFPVEV 244



 Score = 25.8 bits (54), Expect = 1.4
 Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
 Frame = +3

Query: 402 QSRNTSPIPSRRKY--PMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKYLM 575
           +   T P+P  +K   P+    P   P  +K   P P     N +       P+K     
Sbjct: 161 EKSKTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQ------PIKIPIYK 214

Query: 576 KSRSTFDKPYEVKVKVPTPYTVEKKIPYEV 665
                 +KP    V+ P P  VEK  P EV
Sbjct: 215 VIPKVIEKPVPYTVEKPYPIEVEKPFPVEV 244


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 355 AHQNC*GGKEGACSVYSRETRPLY 426
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +3

Query: 468 LSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKYLMKSRSTFDKPYEVKVKV 623
           L+P   K     PSR  ++T  + L+ T  +      +R TF    E+   +
Sbjct: 144 LTPVLAKPSVSQPSRTHTSTNASSLNATNTRTTKTASTRRTFTNSMELTADI 195


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -3

Query: 67   FLLL-GKGNHGQRCHQNNRV 11
            FLL+ GK +HG+  H+ NRV
Sbjct: 961  FLLVNGKISHGELLHRMNRV 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,428
Number of Sequences: 2352
Number of extensions: 12347
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)