Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1572
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.0  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   5.2  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   5.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.0  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 723 FPLELGPFLDSVGLGKRALSLHKG 652
           FP++ G FL S G G    +L+KG
Sbjct: 65  FPIKCGTFLGSGGFGIVYKALYKG 88


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 567 YLMKSRSTFDKPYEVKVKVPTPYTVEKKIPYEVKVPVSP 683
           +L+ SR T   P + K      + ++ K+P++ + P+SP
Sbjct: 407 FLIGSRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSP 445


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = +3

Query: 543 SPTPLKRKYLMKSRSTFDKPYEVKVKVPTPYTVEKKIPYEVKVPVSPALH 692
           +P   +R   + ++++ DKP +V + + T  T    + Y +   V+P L+
Sbjct: 299 APFHAQRLLAVYAQNSKDKPEDVLIIIYTILTYMSGVFYYLSTTVNPLLY 348


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 570 LMKSRSTFDKPYEVKVKVPTPYTVEKKIPYEVK 668
           L++S  +  + Y  KVK    Y   +K+P E++
Sbjct: 377 LIQSLDSSRRQYREKVKQVEEYMAYRKLPREMR 409


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 570 LMKSRSTFDKPYEVKVKVPTPYTVEKKIPYEVK 668
           L++S  +  + Y  KVK    Y   +K+P E++
Sbjct: 345 LIQSLDSSRRQYREKVKQVEEYMAYRKLPREMR 377


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 363 KLLRW*RRCLFRIQSRNTSPIPSRRKYPMR 452
           K L W ++ +F  ++   +P+ S +KY +R
Sbjct: 80  KFLWWYKQGMFLSRNAIFTPLNSEQKYEVR 109


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 597 KPYEVKVKVPTPYTVEKKIPYEVKVPVSP 683
           +PY    ++  P   ++ +PY V V VSP
Sbjct: 594 QPYGFPERLLLPKGKKEGMPYNVLVVVSP 622


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 363 KLLRW*RRCLFRIQSRNTSPIPSRRKYPMR 452
           K L W ++ +F  ++   +P+ S +KY +R
Sbjct: 80  KFLWWYKQGMFLSRNAIFTPLNSEQKYEVR 109


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 597 KPYEVKVKVPTPYTVEKKIPYEVKVPVSP 683
           +PY    ++  P   ++ +PY V V VSP
Sbjct: 594 QPYGFPERLLLPKGKKEGMPYNVLVVVSP 622


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,783
Number of Sequences: 438
Number of extensions: 3638
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)