Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1570
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1095 - 30360067-30360254,30360364-30360484,30360564-303608...    28   5.9  
02_04_0584 - 24082867-24082960,24083071-24083191,24083693-240837...    28   7.8  

>03_05_1095 -
           30360067-30360254,30360364-30360484,30360564-30360804,
           30362361-30362566
          Length = 251

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 654 LVIAYTGE*ATAVLIDASPTGVIYFKPRLQITLLVRIIGPSNDI 523
           L+  + G  A AV +   P G + +    Q  L+ R+ G  NDI
Sbjct: 34  LMKGFAGAHADAVTVSLGPAGALAYSAANQSPLVPRLFGAVNDI 77


>02_04_0584 -
           24082867-24082960,24083071-24083191,24083693-24083786,
           24084675-24084725
          Length = 119

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 536 LVMTSTYVIKFVFEFIDGLVNVKASNVDYSN*YLMPFN 423
           +V   TY I  ++ FIDGL ++ A   D+S    +P++
Sbjct: 64  MVPNITYDITDLYNFIDGLADISALVYDHSIQAFLPYD 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,238,710
Number of Sequences: 37544
Number of extensions: 196278
Number of successful extensions: 206
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)