Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1569
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1160 + 9242541-9242825 35 0.053
05_01_0313 - 2461487-2461861,2461929-2462513,2462819-2464154,246... 32 0.49
02_04_0213 + 20974712-20975413 31 0.65
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 31 1.1
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 31 1.1
11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767 29 2.6
04_04_0156 + 23160681-23160862,23161090-23161179,23163145-231634... 29 3.5
01_06_1154 - 34955235-34955827,34955912-34956045,34956142-349563... 29 3.5
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 29 4.6
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 28 6.1
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 28 6.1
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 28 6.1
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 28 6.1
12_02_0082 - 13372997-13373863,13373928-13374386 28 8.0
06_03_1488 + 30484904-30485134,30485239-30487159,30487255-304876... 28 8.0
03_05_0549 - 25444234-25446792 28 8.0
03_05_0051 - 20288456-20291728 28 8.0
07_03_1369 + 26087947-26088039,26088396-26089073 25 9.6
>01_01_1160 + 9242541-9242825
Length = 94
Score = 35.1 bits (77), Expect = 0.053
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 421 TMPPLVGPSGRLAAFDDDEKAELLADTLQTQCTPSTQS-VDPVHVELVDSEVERRASLPP 597
T P + P AA D+ KA +AD ++ TPS+ S VDP E V + RRAS
Sbjct: 6 TSKPALFPDAANAAIDEAVKA--VADAVRNSFTPSSGSDVDPTTGEAVAAAAARRASKAA 63
Query: 598 SDAL 609
D L
Sbjct: 64 HDTL 67
>05_01_0313 -
2461487-2461861,2461929-2462513,2462819-2464154,
2464231-2464338,2464421-2464743
Length = 908
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 170 TSFTASNCPTILGNSLELRTPRYAPTTVILPRKIVFECVPYN 295
T + AS C +G +LE +P T V+LPR FE +P++
Sbjct: 341 TDYLASECA--IGINLERTSPPEETTYVLLPRAAYFEFIPFD 380
>02_04_0213 + 20974712-20975413
Length = 233
Score = 31.5 bits (68), Expect = 0.65
Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 70 SIPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIREL-------LRAKN 228
+ P+P TA A + + TS+L SS+ + F +DD A
Sbjct: 9 TFPAPAATATATAVAAA-ATSSLAPSSQGGLLWPFSSTMATADDDDAASGGQAVAATAPV 67
Query: 229 ASIRAYDSYPTAENRIRMRALQRDVKSRIAEVRDARWSDFLEGLAPSQRSYYRLARTLKS 408
A+ R D E ++ RD ++ E D W DF + L +L R +
Sbjct: 68 AAARRVDEEEEEERMDQLWERDRDARAGDEERMDLLWEDFNDELL------LQLRRRQQQ 121
Query: 409 DTVVTMPPLVGPSGRLAAFDDDEK 480
PP PS AA DDD++
Sbjct: 122 RAAAGTPPSPSPSPAAAADDDDDE 145
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 1 VDWHTLGISLAESDPPSLPFNPDSIPSPQDTAEAIDILTSHITST 135
VD H + L PP P NP + +P ++A I+ H T
Sbjct: 784 VDPHEVKAKLEPPPPPPAPINPTAATAPSHQSKANQIMPPHAADT 828
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 337 WSDFLEGLAPSQ--RSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELL 492
WS+ L + S +S +RLAR L S + +P V PSG F EKA LL
Sbjct: 572 WSEQLVSVQTSTCIKSKFRLARLL-SFRLYNVPMDVSPSGICGPFKQPEKANLL 624
>11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767
Length = 355
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 10 HTLGISLAESDPPSLPFNPDSIPSP 84
H +G++L PP LP NP + P+P
Sbjct: 61 HIVGVALPLPLPPPLPLNPRATPAP 85
>04_04_0156 +
23160681-23160862,23161090-23161179,23163145-23163433,
23164574-23164669,23164755-23165123
Length = 341
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 448 GRLAAFDDDEKAELLADTLQTQCTPSTQSVD---PVHVELVDSEVERRASL-PPS 600
G L +DD A+ + ++QC + D PVHV ++ + +A L PPS
Sbjct: 172 GPLRDYDDPANADFIESIKKSQCPQELEPADRRTPVHVNVIKRLEDYQAPLRPPS 226
>01_06_1154 -
34955235-34955827,34955912-34956045,34956142-34956389,
34956431-34956901
Length = 481
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 274 IRMRALQRDVKSRIAEVRDARWSDFLEGLAPSQRSYYRLARTLK 405
+R++AL + +SR+A+ + + DF+ L P R Y R+ +K
Sbjct: 182 LRLKALNGE-RSRLAQSFEYNYGDFIPILRPFLRGYLRICEEVK 224
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +1
Query: 4 DWHTLGISLAESDPPSLPFNPDSIPSPQDTAEAIDILTSHITSTLDRSSKQV 159
D HTLG L + PPS P P S P A T + TL +S V
Sbjct: 1110 DRHTLGPPLPDDRPPSPPPLPSSPPPVPPPPPAPITQTGQLQRTLPMASDPV 1161
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +1
Query: 64 PDSIPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 243
P ++P ++ E IDI S ++ R +Q++ +H + + + + S++A
Sbjct: 309 PANLPVSENHTEQIDIQLSKQHAS--RFLQQIMDCHLVHHGEYLNKAKFHPNTLDQSVKA 366
Query: 244 YDSYPTAENRIRMRALQRDVKSRIAE 321
Y + T + + ++ +V SR++E
Sbjct: 367 YGEFQTMQASQEVSTIENEVLSRVSE 392
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 313 IAEVRDARWSDFLEGLAPSQRSYYRL-ARTLKSDTVVTMPPLVGPS 447
+A + W L+GLA + +YY+ AR K TVV++P GPS
Sbjct: 144 LAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPN--GPS 187
>07_03_1486 + 26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 472 DEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDALPPVTP 624
DE A +L D S S+D + +E + +++ ++LPP+ LPP P
Sbjct: 1574 DEAAPILEDRGMAPSVSSRLSLDEI-IE-ISCDLDAVSALPPAKPLPPQPP 1622
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 565 SEVERRASLPPSDALPPVTPMGS*RLDQRPTSS 663
SEV RR PP LPP+ PM R + R S
Sbjct: 178 SEVARRYYEPPQVMLPPLAPMQLTRAEHRVIDS 210
>12_02_0082 - 13372997-13373863,13373928-13374386
Length = 441
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 559 VDSEVERRASLPPSDALPPVTPMGS*RLDQRPTSSQGFPVPTVY 690
+D +AS+P S VTP+ L +P Q F T+Y
Sbjct: 185 IDCRYSTKASIPVSPIAVDVTPLALAPLTSQPAIKQVFLAQTIY 228
>06_03_1488 +
30484904-30485134,30485239-30487159,30487255-30487691,
30487777-30487983
Length = 931
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 167 RTSFTASNCPTILGNSLELRTPRY 238
RT FTAS CPTI + + RY
Sbjct: 220 RTVFTASGCPTITSSRHRMEEGRY 243
>03_05_0549 - 25444234-25446792
Length = 852
Score = 27.9 bits (59), Expect = 8.0
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Frame = +1
Query: 334 RWSDFLEGLAPSQRSYYRLARTLKS--DTVVTMPPLVGPSGRLAAFDDDEKA------EL 489
R+ ++ +A + R L R L+ DT V M +G LA +DD+ A L
Sbjct: 286 RFDANVKQMADNGRLQPLLTRLLRGEPDTRVAMADYLG---ELALANDDKAAVAEQAGPL 342
Query: 490 LADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDALPPV 618
L L+T TP+ ++ E+ SE + L + LPP+
Sbjct: 343 LVGMLRTGATPAKEATLKALREISSSEASAKLLLQRAGVLPPL 385
>03_05_0051 - 20288456-20291728
Length = 1090
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 205 RELLRAKNASIRAYDSYPTAENRIRMRALQRDVKSRIAEVRDARWSDFLEGLAPSQRSYY 384
RE+L + ++S +DS T NR+++ R V R V D WS+ LA ++
Sbjct: 256 REMLESVSSSRFRHDSI-TNFNRLQVALRARLVSKRFLLVLDDVWSNDKITLAIEHENWQ 314
Query: 385 RLARTLKS 408
+L LK+
Sbjct: 315 KLLSPLKA 322
>07_03_1369 + 26087947-26088039,26088396-26089073
Length = 256
Score = 25.0 bits (52), Expect(2) = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 476 KKQSCWPIHCKPSARPALNPWTL 544
++Q CWP +C + L PW +
Sbjct: 98 RRQKCWPEYCDDGNK--LRPWEI 118
Score = 21.0 bits (42), Expect(2) = 9.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 626 WEVKDLIKDL 655
WE+KDL+ +L
Sbjct: 116 WEIKDLVAEL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,201,506
Number of Sequences: 37544
Number of extensions: 454179
Number of successful extensions: 1335
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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